RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TSGA13Q96PP4 275 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 TMEM209Q96SK2 561 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 NXF2Q9GZY0 626 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 GLOD4Q9HC38 313 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FBXW11Q9UKB1 542 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CRYL1Q9Y2S2 319 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 ORC6Q9Y5N6 252 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 TSC2P49815 1807 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 RLFQ13129 1914 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 DFFAO00273 331 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 CLDN5O00501 218 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 CCL22O00626 93 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ITGAMP11215 1152 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 PRKACBP22694 351 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 S100A5P33763 92 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 DDOSTP39656 456 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 RABGGTBP53611 331 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 IL1RL1Q01638 556 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SMU1Q2TAY7 513 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ZC3H12BQ5HYM0 836 aaKnown RBP10.49□□□□□ -0.73
CCDC171-208ENST00000486641 PRSS36Q5K4E3 855 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF438Q7Z4V0 828 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 DPP9Q86TI2 863 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 CILP2Q8IUL8 1156 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ADHFE1Q8IWW8 467 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 DEPDC4Q8N2C3 294 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SETD9Q8NE22 299 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 JPH3Q8WXH2 748 aaPredicted RBP10.49□□□□□ -0.73
CCDC171-208ENST00000486641 BHMTQ93088 406 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 NTAN1Q96AB6 310 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 MRGPRX2Q96LB1 330 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SLC2A13Q96QE2 648 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SLC9A7Q96T83 725 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ACOX2Q99424 681 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 GMLQ99445 158 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 TEX13BQ9BXU2 312 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 NUAK2Q9H093 628 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 RIBC2Q9H4K1 309 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SLA2Q9H6Q3 261 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 RNF167Q9H6Y7 350 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 PLEKHA5Q9HAU0 1116 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 TM9SF3Q9HD45 589 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 TRMT13Q9NUP7 481 aaKnown RBP10.49□□□□□ -0.73
CCDC171-208ENST00000486641 GIMAP4Q9NUV9 329 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 C14orf119Q9NWQ9 140 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 OR12D3Q9UGF7 316 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ADAMTS5Q9UNA0 930 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 KCNH4Q9UQ05 1017 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 PKP3Q9Y446 797 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 NEUROG3Q9Y4Z2 214 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SBF1O95248 1867 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 FAM20BO75063 409 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 S1PR4O95977 384 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 KRT6AP02538 564 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 KRT6BP04259 564 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 GADD45AP24522 165 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SLC26A3P40879 764 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SCNN1GP51170 649 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 DGKQP52824 942 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 CXCR4P61073 352 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 GPLD1P80108 840 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 MVKQ03426 396 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SCAPQ12770 1279 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 LCP2Q13094 533 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 PRKG2Q13237 762 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 LAPTM4AQ15012 233 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 FAM187BQ17R55 369 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ATP6AP1LQ52LC2 224 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 METTL7BQ6UX53 244 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 RANBP10Q6VN20 620 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.49□□□□□ -0.73
CCDC171-208ENST00000486641 PRR23CQ6ZRP0 262 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 NATD1Q8N6N6 113 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 OR2T12Q8NG77 320 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 OR10A6Q8NH74 314 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 UBE2FQ969M7 185 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF599Q96NL3 588 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 NEDD4LQ96PU5 975 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 CAMKK2Q96RR4 588 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SDHCQ99643 169 aaPredicted RBP10.49□□□□□ -0.73
CCDC171-208ENST00000486641 BARD1Q99728 777 aaKnown RBP10.49□□□□□ -0.73
CCDC171-208ENST00000486641 FSD1LQ9BXM9 530 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ITPAQ9BY32 194 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ENTPD7Q9NQZ7 604 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 ZIM2Q9NZV7 527 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 SATB2Q9UPW6 733 aa10.49□□□□□ -0.73
CCDC171-208ENST00000486641 A0A0G2JMP0 313 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 A0A0U1RQS6 177 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 OR51F1A6NGY5 319 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 M0R082 166 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 MED26O95402 600 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 IGFBP5P24593 272 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 RRM2P31350 389 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 GEMP55040 296 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 HUNKP57058 714 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 ERVK-8P63133 956 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 TIAL1Q01085 375 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC171-208ENST00000486641 YWHAHQ04917 246 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-208ENST00000486641 GPR50Q13585 617 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 PCSK7Q16549 785 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms