RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SEPHS1P49903 392 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 CDKN1CP49918 316 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-208ENST00000486404 PRAMEP78395 509 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 RHDQ02161 417 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 FOXM1Q08050 763 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 SYTL3Q4VX76 610 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 TAF1BQ53T94 588 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-208ENST00000486404 CYB5D1Q6P9G0 228 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 FAM92BQ6ZTR7 304 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 NLRP9Q7RTR0 991 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 PRSS42Q7Z5A4 293 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 OOSP2Q86WS3 158 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 IL22RA1Q8N6P7 574 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 GLIS1Q8NBF1 620 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 RANBP9Q96S59 729 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 CTRCQ99895 268 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 ZPBPQ9BS86 351 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 CCM2Q9BSQ5 444 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 TCAF1Q9Y4C2 921 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 COLEC10Q9Y6Z7 277 aa12.6□□□□□ -0.39
CHMP3-208ENST00000486404 IGLV3-16A0A075B6K0 115 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 CCDC162PA2VCL2 907 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 OR51F1A6NGY5 319 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 K7ENP7 123 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 AP3B1O00203 1094 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 FTH1P02794 183 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 GSTM1P09488 218 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 ADRA1DP25100 572 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 NDUFS1P28331 727 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 RPL22P35268 128 aaKnown RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 ARL4DP49703 201 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 ARSDP51689 593 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 SESN2P58004 480 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 MC2RQ01718 297 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 GSTM4Q03013 218 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 ITIH4Q14624 930 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 SOWAHCQ53LP3 525 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 DNTTIP2Q5QJE6 756 aaKnown RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 TSTD2Q5T7W7 516 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 CACHD1Q5VU97 1274 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 LYPLAL1Q5VWZ2 237 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 INO80CQ6PI98 192 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 CLDN19Q8N6F1 224 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 BMPERQ8N8U9 685 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 OR6P1Q8NGX9 317 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 INSM2Q96T92 566 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 NAP1L3Q99457 506 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 ZNF768Q9H5H4 540 aaKnown RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 CASS4Q9NQ75 786 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 DRG1Q9Y295 367 aaKnown RBP12.59□□□□□ -0.39
CHMP3-208ENST00000486404 JRKLQ9Y4A0 524 aa12.59□□□□□ -0.39
CHMP3-208ENST00000486404 C17orf113A0A1B0GUU1 675 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 ATXN7O15265 892 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 SGTAO43765 313 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 RAD1O60671 282 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 GOT2P00505 430 aaKnown RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 OR56A5P0C7T3 313 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 FOXN2P32314 431 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 PPARGP37231 505 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 GRIA1P42261 906 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 KCNJ1P48048 391 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 PREPP48147 710 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 VPS41P49754 854 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 PRKAA1Q13131 559 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 BOP1Q14137 746 aaKnown RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 FASTKD1Q53R41 847 aaKnown RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 KIAA1614Q5VZ46 1190 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 PACS1Q6VY07 963 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 MICALCLQ6ZW33 695 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 PIANPQ8IYJ0 282 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 CACNA2D3Q8IZS8 1091 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 LILRA3Q8N6C8 439 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 OR13J1Q8NGT2 312 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 ELMO1Q92556 727 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 UBXN4Q92575 508 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 HDAC10Q969S8 669 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 KIAA1143Q96AT1 154 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-208ENST00000486404 PBKQ96KB5 322 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 CD180Q99467 661 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 TSSK1BQ9BXA7 367 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 IL22Q9GZX6 179 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 BFARQ9NZS9 450 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 EPHA6Q9UF33 1036 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 SLC2A6Q9UGQ3 507 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 SLC24A2Q9UI40 661 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 ANAPC5Q9UJX4 755 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.4
CHMP3-208ENST00000486404 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 UBA6A0AVT1 1052 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-208ENST00000486404 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
CHMP3-208ENST00000486404 PGRMC1O00264 195 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms