RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 FAM120CQ9NX05 1096 aaKnown RBP3.33□□□□□ -1.88
GCFC2-209ENST00000486016 TAB2Q9NYJ8 693 aa3.33□□□□□ -1.88
GCFC2-209ENST00000486016 ARHGAP26Q9UNA1 814 aa3.33□□□□□ -1.88
GCFC2-209ENST00000486016 R3HDM2Q9Y2K5 976 aaKnown RBP3.33□□□□□ -1.88
GCFC2-209ENST00000486016 MSGN1A6NI15 193 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 DNM1LO00429 736 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 DUS4LO95620 317 aaKnown RBP3.32□□□□□ -1.88
GCFC2-209ENST00000486016 GPR143P51810 404 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 NIPAL4Q0D2K0 466 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 RIGQ13278 110 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 HEATR4Q86WZ0 1026 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 GALNT13Q8IUC8 556 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 HACE1Q8IYU2 909 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 HJURPQ8NCD3 748 aaPredicted RBP3.32□□□□□ -1.88
GCFC2-209ENST00000486016 PRSS33Q8NF86 280 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 GSDMBQ8TAX9 411 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 ZUFSPQ96AP4 578 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 RRP36Q96EU6 259 aaKnown RBP3.32□□□□□ -1.88
GCFC2-209ENST00000486016 ZNF414Q96IQ9 312 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 SCLT1Q96NL6 688 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 MIOSQ9NXC5 875 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 FLRT3Q9NZU0 649 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 PDP2Q9P2J9 529 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 CROCCQ5TZA2 2017 aa3.32□□□□□ -1.88
GCFC2-209ENST00000486016 MEX3AA1L020 520 aaKnown RBP3.31□□□□□ -1.88
GCFC2-209ENST00000486016 ATP6V0E1O15342 81 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 TMCC2O75069 709 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 NDUFS3O75489 264 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 ACP2P11117 423 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 ACADSP16219 412 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 CDH11P55287 796 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 GPR17Q13304 367 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 NAB2Q15742 525 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 KLC3Q6P597 504 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 IL27RAQ6UWB1 636 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 GLDNQ6ZMI3 551 aaPredicted RBP3.31□□□□□ -1.88
GCFC2-209ENST00000486016 ARHGAP12Q8IWW6 846 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 FBXL16Q8N461 479 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 LINC00612Q8N6U2 182 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 TMEM178AQ8NBL3 297 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 DENND2DQ9H6A0 471 aaPredicted RBP3.31□□□□□ -1.88
GCFC2-209ENST00000486016 OLFML3Q9NRN5 406 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 DBNLQ9UJU6 430 aaKnown RBP3.31□□□□□ -1.88
GCFC2-209ENST00000486016 SLC7A7Q9UM01 511 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 MYH15Q9Y2K3 1946 aa3.31□□□□□ -1.88
GCFC2-209ENST00000486016 EPM2AB3EWF7 344 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 H3BQ06 376 aaPredicted RBP3.3□□□□□ -1.88
GCFC2-209ENST00000486016 CDC123O75794 336 aaPredicted RBP3.3□□□□□ -1.88
GCFC2-209ENST00000486016 HIST1H2ABP04908 130 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 H1F0P07305 194 aaKnown RBP3.3□□□□□ -1.88
GCFC2-209ENST00000486016 KRTAP1-4P0C5Y4 121 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 XBP1P17861 261 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 HIST1H2ADP20671 130 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 BSGP35613 385 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 MSH2P43246 934 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 MAPK9P45984 424 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 TFAP4Q01664 338 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 MEP1AQ16819 746 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 FASTKD1Q53R41 847 aaKnown RBP3.3□□□□□ -1.88
GCFC2-209ENST00000486016 DCAF10Q5QP82 559 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 ZDHHC20Q5W0Z9 365 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 TMEM198Q66K66 360 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 ZNF343Q6P1L6 599 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 RSRC2Q7L4I2 434 aaKnown RBP3.3□□□□□ -1.88
GCFC2-209ENST00000486016 HIST3H2AQ7L7L0 130 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 NGEFQ8N5V2 710 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 OMA1Q96E52 524 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 ERAP1Q9NZ08 941 aa3.3□□□□□ -1.88
GCFC2-209ENST00000486016 A0A1W2PPR1 153 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 A8MU10 97 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 SCAMP1O15126 338 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 GPIP06744 558 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 DNAH10OSP0CZ25 163 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 BIRC3Q13489 604 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 PAQR6Q6TCH4 344 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 LINGO4Q6UY18 593 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 R3HCC1LQ7Z5L2 792 aaKnown RBP3.29□□□□□ -1.88
GCFC2-209ENST00000486016 PIGZQ86VD9 579 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 Q8N377 158 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 SGK494Q96LW2 274 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 ZNF582Q96NG8 517 aaPredicted RBP3.29□□□□□ -1.88
GCFC2-209ENST00000486016 PIGQQ9BRB3 760 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 PREBQ9HCU5 417 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 SETD4Q9NVD3 440 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.29□□□□□ -1.88
GCFC2-209ENST00000486016 TP53TG3Q9ULZ0 132 aa3.29□□□□□ -1.88
GCFC2-209ENST00000486016 ASTN2O75129 1339 aaPredicted RBP3.28□□□□□ -1.88
GCFC2-209ENST00000486016 FAM237BA0A1B0GVD1 139 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 A0A1W2PPH5 198 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 OGG1O15527 345 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 SPARCP09486 303 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 ZSCAN5DPP0CG00 497 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 EFNA1P20827 205 aaPredicted RBP3.28□□□□□ -1.88
GCFC2-209ENST00000486016 HNF4AP41235 474 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 MAGEA11P43364 429 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 B3GALT5-AS1P59052 145 aa3.28□□□□□ -1.88
GCFC2-209ENST00000486016 RPS18P62269 152 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms