RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 FNTBP49356 437 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 GATMP50440 423 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 HSD17B4P51659 736 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 PRKAA2P54646 552 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 MFAP3P55082 362 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 HUNKP57058 714 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 TSPAN5P62079 268 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 PSMC6P62333 389 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 DSC2Q02487 901 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 KDSRQ06136 332 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 KLRC3Q07444 240 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 HNRNPA0Q13151 305 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 RAPSNQ13702 412 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 LSM12Q3MHD2 195 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD20A4Q4UJ75 823 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD20A8PQ5CZ79 823 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 CFAP157Q5JU67 520 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD20A2Q5SQ80 823 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD20A1Q5TYW2 823 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 STRIP1Q5VSL9 837 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 GKAP1Q5VSY0 366 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKRD20A3Q5VUR7 823 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 NAIF1Q69YI7 327 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 PTRHD1Q6GMV3 140 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 GRAMD4Q6IC98 578 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 MFSD5Q6N075 450 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 USP17L6PQ6QN14 398 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 TMEM270Q6UE05 265 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 MAMDC4Q6UXC1 1216 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 ZNF704Q6ZNC4 412 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 USP30Q70CQ3 517 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 H1FNTQ75WM6 255 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 LRRC8DQ7L1W4 858 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 CXXC5Q7LFL8 322 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 OTOP1Q7RTM1 612 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 NIPA1Q7RTP0 329 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 GPR142Q7Z601 462 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 RTN4RL1Q86UN2 441 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 TPRA1Q86W33 373 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 CCDC50Q8IVM0 306 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 BCL6BQ8N143 479 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 KDM8Q8N371 416 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 SH2D3CQ8N5H7 860 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC17A8Q8NDX2 589 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 SETD9Q8NE22 299 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 IL31RAQ8NI17 732 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 LMO3Q8TAP4 145 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 PDCD6IPQ8WUM4 868 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 DNAJA4Q8WW22 397 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 MAIP1Q8WWC4 291 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 IFT81Q8WYA0 676 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC9A6Q92581 669 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 SEPT8Q92599 483 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 CD101Q93033 1021 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 C14orf79Q96F83 325 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 SLC47A1Q96FL8 570 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 CHMP6Q96FZ7 201 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 TMEM176AQ96HP8 235 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM71F1Q96KD3 344 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 MSLNLQ96KJ4 702 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 GCNAQ96QF7 691 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 FMO2Q99518 471 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 NAA11Q9BSU3 229 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 TPPP3Q9BW30 176 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 WDR11Q9BZH6 1224 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 ROPN1BQ9BZX4 212 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM192AQ9GZU8 254 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 DDX47Q9H0S4 455 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 NEUROG2Q9H2A3 272 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 PABPC3Q9H361 631 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 ROPN1Q9HAT0 212 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 SCPEP1Q9HB40 452 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 TMEM8AQ9HCN3 771 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 PALMDQ9NP74 551 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 NECTIN3Q9NQS3 549 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 FARSBQ9NSD9 589 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 GIMAP4Q9NUV9 329 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM120CQ9NX05 1096 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 IGSF9Q9P2J2 1179 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 ANKMY1Q9P2S6 941 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 INTS6Q9UL03 887 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 CORO1CQ9ULV4 474 aaPredicted RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 CFL2Q9Y281 166 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 UTP11Q9Y3A2 253 aaKnown RBP4□□□□□ -1.77
PRPF38B-205ENST00000485810 PCDHA3Q9Y5H8 950 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 DMRT1Q9Y5R6 373 aa4□□□□□ -1.77
PRPF38B-205ENST00000485810 FAM234BA2RU67 622 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 CCDC154A6NI56 674 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 MYO1GB0I1T2 1018 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 SPECC1L-ADORA2AF8WAN1 911 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 FCHO1O14526 889 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 KIAA0391O15091 583 aaKnown RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 CHUKO15111 745 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 LSM1O15116 133 aaKnown RBP3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 OGTO15294 1046 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 TOM1O60784 492 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 TMCC1O94876 653 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 KCNK5O95279 499 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 NDUFB10O96000 172 aa3.99□□□□□ -1.77
PRPF38B-205ENST00000485810 F9P00740 461 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms