RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 TTI1O43156 1089 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 BANF1O75531 89 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 AP2A2O94973 939 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 F7P08709 466 aaPredicted RBP15.87■□□□□ 0.13
DDR1-246ENST00000485023 OR56A5P0C7T3 313 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 THRAP10827 490 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 AMD1P17707 334 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 ARNTP27540 789 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 PDHA2P29803 388 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 ETV5P41161 510 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 MAPK10P53779 464 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 GFERP55789 205 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 ETF1P62495 437 aaKnown RBP15.87■□□□□ 0.13
DDR1-246ENST00000485023 TBC1D25Q3MII6 688 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 SYTL3Q4VX76 610 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 AARS2Q5JTZ9 985 aaKnown RBP15.87■□□□□ 0.13
DDR1-246ENST00000485023 RNASEH2BQ5TBB1 312 aaKnown RBP15.87■□□□□ 0.13
DDR1-246ENST00000485023 TMEM71Q6P5X7 295 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 CERS6Q6ZMG9 384 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 AGGF1Q8N302 714 aaeCLIP15.87■□□□□ 0.13
DDR1-246ENST00000485023 MCUQ8NE86 351 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 OR4D9Q8NGE8 314 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 LKAAEAR1Q8TD35 194 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 C16orf45Q96MC5 204 aaPredicted RBP15.87■□□□□ 0.13
DDR1-246ENST00000485023 CMKLR1Q99788 373 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 TRIM31Q9BZY9 425 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 ASCL3Q9NQ33 180 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 USP24Q9UPU5 2620 aa15.87■□□□□ 0.13
DDR1-246ENST00000485023 UBA6A0AVT1 1052 aaPredicted RBP15.86■□□□□ 0.13
DDR1-246ENST00000485023 SDR42E2A6NKP2 422 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 IQCF5A8MTL0 148 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 FTH1P02794 183 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 MLNP12872 115 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 C2orf54Q08AI8 447 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 EIF3IQ13347 325 aaKnown RBP15.86■□□□□ 0.13
DDR1-246ENST00000485023 KRT33BQ14525 404 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 CLPPQ16740 277 aaPredicted RBP15.86■□□□□ 0.13
DDR1-246ENST00000485023 LSMEM2Q8N112 164 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 KRT222Q8N1A0 295 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 SLCO2A1Q92959 643 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 FCRL3Q96P31 734 aaPredicted RBP15.86■□□□□ 0.13
DDR1-246ENST00000485023 TGM7Q96PF1 710 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 UCK1Q9HA47 277 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 THSD1Q9NS62 852 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 WDR70Q9NW82 654 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 AKAP7Q9P0M2 348 aaPredicted RBP15.86■□□□□ 0.13
DDR1-246ENST00000485023 PCDHGA8Q9Y5G5 932 aa15.86■□□□□ 0.13
DDR1-246ENST00000485023 C17orf113A0A1B0GUU1 675 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 KLHL33A6NCF5 533 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 CCDC188H7C350 402 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 QSOX1O00391 747 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 IFRD1O00458 451 aaPredicted RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 NDUFS3O75489 264 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 CCL4P13236 92 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 PAMP19021 973 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 PPARGP37231 505 aaPredicted RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 CAPZBP47756 277 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 LEPRP48357 1165 aaKnown RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 TTPAP49638 278 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 EIF3BP55884 814 aaKnown RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 PPP1CAP62136 330 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 SQSTM1Q13501 440 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 COL9A2Q14055 689 aaPredicted RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 DHX34Q14147 1143 aaKnown RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 ZNF658BQ4V348 819 aaPredicted RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 KIAA0930Q6ICG6 404 aaPredicted RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 CAPRIN2Q6IMN6 1127 aaKnown RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 IRGCQ6NXR0 463 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 WDR74Q6RFH5 385 aaPredicted RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 FAM129CQ86XR2 697 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 RBM12BQ8IXT5 1001 aaKnown RBP15.85■□□□□ 0.13
DDR1-246ENST00000485023 FGF11Q92914 225 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 SGSM3Q96HU1 749 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 PWWP2AQ96N64 755 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 RUNDC3BQ96NL0 473 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 SLC46A1Q96NT5 459 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 FERD3LQ96RJ6 166 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 OR52A5Q9H2C5 316 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 RPS6KL1Q9Y6S9 549 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 ATRXP46100 2492 aa15.85■□□□□ 0.13
DDR1-246ENST00000485023 FAM237BA0A1B0GVD1 139 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 DXOO77932 396 aaKnown RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 ITGA2BP08514 1039 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 CSTF2P33240 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
DDR1-246ENST00000485023 MAGEA3P43357 314 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 ARCN1P48444 511 aaKnown RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 PCBP4P57723 403 aaKnown RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 ANKRD20A4Q4UJ75 823 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 PTRHD1Q6GMV3 140 aaKnown RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 ZNF449Q6P9G9 518 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 C19orf48Q6RUI8 117 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 FAM92BQ6ZTR7 304 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 SYDE1Q6ZW31 735 aaPredicted RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 PHC3Q8NDX5 983 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 SNIP1Q8TAD8 396 aaKnown RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 PMEPA1Q969W9 287 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 STAMBPL1Q96FJ0 436 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 ZNF578Q96N58 590 aaPredicted RBP15.84■□□□□ 0.13
DDR1-246ENST00000485023 NRTNQ99748 197 aa15.84■□□□□ 0.13
DDR1-246ENST00000485023 DPYSL5Q9BPU6 564 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms