RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 KRT33BQ14525 404 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 ASIC2Q16515 512 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 LETM2Q2VYF4 491 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 CST9LP1Q5W188 147 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 ZNF324BQ6AW86 544 aaPredicted RBP6.42□□□□□ -1.38
UBR3-210ENST00000484596 GAGE2AQ6NT46 116 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 UNQ6126/PRO20091Q6UXV3 157 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 PLEKHM3Q6ZWE6 761 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 C16orf82Q7Z2V1 217 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 RBM23Q86U06 439 aaKnown RBP6.42□□□□□ -1.38
UBR3-210ENST00000484596 KMT5CQ86Y97 462 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 ACVR1CQ8NER5 493 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 HMGCLL1Q8TB92 370 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 MRPS27Q92552 414 aaKnown RBP6.42□□□□□ -1.38
UBR3-210ENST00000484596 CFAP57Q96MR6 1250 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 NEURL2Q9BR09 285 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 PFDN4Q9NQP4 134 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 ABCF3Q9NUQ8 709 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 RASAL2Q9UJF2 1139 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 POU2F3Q9UKI9 436 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 ZNF148Q9UQR1 794 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 PCDHAC2Q9Y5I4 1007 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 IQGAP2Q13576 1575 aa6.42□□□□□ -1.38
UBR3-210ENST00000484596 SAA2-SAA4A0A096LPE2 208 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 EME2A4GXA9 379 aaPredicted RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 ANKRD66B4E2M5 251 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 H0Y626 953 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 NDUFS4O43181 175 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 PLPP2O43688 288 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 DIAPH2O60879 1101 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 ZNF217O75362 1048 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 PRLRP16471 622 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 POLR2CP19387 275 aaPredicted RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 HRH2P25021 359 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 CSE1LP55060 971 aaKnown RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 BRWD1-AS2P59051 145 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 SLC20A2Q08357 652 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 ZNF234Q14588 700 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 MFSD6Q6ZSS7 791 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 TC2NQ8N9U0 490 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 KIF18AQ8NI77 898 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 SLC20A1Q8WUM9 679 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 LPGAT1Q92604 370 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 FER1L6-AS2Q96M78 137 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 CDRT15Q96T59 188 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 DDOQ99489 341 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 NAA11Q9BSU3 229 aaPredicted RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 MMP27Q9H306 513 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 ST6GALNAC4Q9H4F1 302 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 DDX31Q9H8H2 851 aaKnown RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 FKRPQ9H9S5 495 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 EBF2Q9HAK2 575 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 TCP11L1Q9NUJ3 509 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 RCC2Q9P258 522 aaKnown RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 CRNNQ9UBG3 495 aaPredicted RBP6.41□□□□□ -1.38
UBR3-210ENST00000484596 CGNL1Q0VF96 1302 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 PRAG1Q86YV5 1406 aa6.41□□□□□ -1.38
UBR3-210ENST00000484596 TRIP12Q14669 1992 aaPredicted RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 KIAA0556O60303 1618 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 IGHV4OR15-8A0A075B7B6 117 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 PLSCR5A0PG75 271 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 C15orf62A8K5M9 175 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 ZNF587BE7ETH6 402 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 SLC16A5O15375 505 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 C22orf31O95567 290 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 PPP1R3DO95685 299 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 BCL10O95999 233 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 MYOD1P15172 320 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 PTAFRP25105 342 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 MC5RP33032 325 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 GP5P40197 560 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 IZUMO4Q1ZYL8 232 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 IRAK1BP1Q5VVH5 260 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 C9orf57Q5W0N0 161 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 DHRS7BQ6IAN0 325 aaPredicted RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 FAM109BQ6ICB4 259 aaPredicted RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 SHQ1Q6PI26 577 aaKnown RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 RBPMS2Q6ZRY4 209 aaKnown RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 INTS8Q75QN2 995 aaKnown RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 ARMC9Q7Z3E5 817 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 CAMKMTQ7Z624 323 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 METTL23Q86XA0 190 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 IQCA1Q86XH1 822 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.4□□□□□ -1.38
UBR3-210ENST00000484596 XXYLT1Q8NBI6 393 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 LNX1Q8TBB1 728 aaPredicted RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 SLC44A1Q8WWI5 657 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 SMC6Q96SB8 1091 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 SYT17Q9BSW7 474 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 DESI2Q9BSY9 194 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 C1QTNF4Q9BXJ3 329 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 SPATC1LQ9H0A9 340 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 LRMDAQ9H2I8 198 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 CHMP1AQ9HD42 196 aaPredicted RBP6.4□□□□□ -1.38
UBR3-210ENST00000484596 TUBE1Q9UJT0 475 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 KCNS2Q9ULS6 477 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms