RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 FAM169AQ9Y6X4 670 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 SPEGQ15772 3267 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 CACNA1GO43497 2377 aa15.55■□□□□ 0.08
UPF3A-208ENST00000484246 TPRP12270 2363 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 GOLGA4Q13439 2230 aaKnown RBP15.55■□□□□ 0.08
UPF3A-208ENST00000484246 TRBV23OR9-2A0A075B6M9 112 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 SLC5A10A0PJK1 596 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 PFDN6O15212 129 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 DXOO77932 396 aaKnown RBP15.54■□□□□ 0.08
UPF3A-208ENST00000484246 POLBP06746 335 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 NDUFS1P28331 727 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 ALDH4A1P30038 563 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 MLLT3P42568 568 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-208ENST00000484246 INHBCP55103 352 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 ARL4CP56559 192 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 TRA2AQ13595 282 aaKnown RBP eCLIP15.54■□□□□ 0.081e-9■■■■□ 26.1
UPF3A-208ENST00000484246 LONRF1Q17RB8 773 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 MAP9Q49MG5 647 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 SPANXN3Q5MJ09 141 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 STEAP4Q687X5 459 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 WDR74Q6RFH5 385 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-208ENST00000484246 MARCH9Q86YJ5 346 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 CFAP206Q8IYR0 622 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 LILRA3Q8N6C8 439 aaPredicted RBP15.54■□□□□ 0.08
UPF3A-208ENST00000484246 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
UPF3A-208ENST00000484246 OR4D9Q8NGE8 314 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 TMEM159Q96B96 161 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 DCBLD2Q96PD2 775 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 WDR83Q9BRX9 315 aaKnown RBP15.54■□□□□ 0.08
UPF3A-208ENST00000484246 WWP1Q9H0M0 922 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 RAB17Q9H0T7 212 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 EPB41L5Q9HCM4 733 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 GNPTGQ9UJJ9 305 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 PCDHB1Q9Y5F3 818 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 PCDHGA8Q9Y5G5 932 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 HEBP2Q9Y5Z4 205 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 TEX264Q9Y6I9 313 aa15.54■□□□□ 0.08
UPF3A-208ENST00000484246 MN1Q10571 1320 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-208ENST00000484246 TRABD2BA6NFA1 517 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 H3BMM5 538 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 NDUFS3O75489 264 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 ESR1P03372 595 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 PROS1P07225 676 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 CFHR1Q03591 330 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 ZNF470Q6ECI4 717 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 ZNF449Q6P9G9 518 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 CENPUQ71F23 418 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 TMPRSS9Q7Z410 1059 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 B3GNT8Q7Z7M8 397 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 LDB1Q86U70 411 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-208ENST00000484246 PDZD3Q86UT5 571 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 PIM3Q86V86 326 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 CNTN4Q8IWV2 1026 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 KDF1Q8NAX2 398 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-208ENST00000484246 KIF18AQ8NI77 898 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 CALML6Q8TD86 181 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 PANX3Q96QZ0 392 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 INSM2Q96T92 566 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-208ENST00000484246 NUDT22Q9BRQ3 303 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 FAM167BQ9BTA0 163 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 TRIM31Q9BZY9 425 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 STRADBQ9C0K7 418 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 SYNDIG1Q9H7V2 258 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 PLAC1Q9HBJ0 212 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 GRHL1Q9NZI5 618 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 ATXN7L1Q9ULK2 861 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-208ENST00000484246 SNX24Q9Y343 169 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 CEP295Q9C0D2 2601 aa15.53■□□□□ 0.08
UPF3A-208ENST00000484246 CCDC187A0A096LP49 1063 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 C1QTNF9BB2RNN3 333 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 HGSO14964 777 aaPredicted RBP15.52■□□□□ 0.08
UPF3A-208ENST00000484246 EIF3HO15372 352 aaKnown RBP eCLIP15.52■□□□□ 0.08
UPF3A-208ENST00000484246 GPC4O75487 556 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 C1QTNF9P0C862 333 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 THRAP10827 490 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 CAPZBP47756 277 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 LSSP48449 732 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 LIMK2P53671 638 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 CALCOCO2Q13137 446 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 THOC5Q13769 683 aaKnown RBP15.52■□□□□ 0.08
UPF3A-208ENST00000484246 GPR18Q14330 331 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 BBS9Q3SYG4 887 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 TMEM71Q6P5X7 295 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 GALNT7Q86SF2 657 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 ZNF761Q86XN6 746 aaPredicted RBP15.52■□□□□ 0.08
UPF3A-208ENST00000484246 IGDCC3Q8IVU1 814 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 SEC14L1Q92503 715 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 ELMO1Q92556 727 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 ATXN7L3BQ96GX2 97 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 C12orf66Q96MD2 445 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 BIRC8Q96P09 236 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 TBC1D10AQ9BXI6 508 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 RAB33BQ9H082 229 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 KIR3DX1Q9H7L2 352 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 IMP3Q9NV31 184 aaKnown RBP15.52■□□□□ 0.08
UPF3A-208ENST00000484246 OGFRQ9NZT2 677 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 EPHA6Q9UF33 1036 aa15.52■□□□□ 0.08
UPF3A-208ENST00000484246 PSMD13Q9UNM6 376 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms