RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MCEEQ96PE7 176 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 FAM111AQ96PZ2 611 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 EBNA1BP2Q99848 306 aaKnown RBP4.79□□□□□ -1.64
SSBP1-211ENST00000484178 TMEM121Q9BTD3 319 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 EFHD1Q9BUP0 239 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 CCDC106Q9BWC9 280 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 NFKBIZQ9BYH8 718 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 SDCBP2Q9H190 292 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 POLR3FQ9H1D9 316 aaPredicted RBP4.79□□□□□ -1.64
SSBP1-211ENST00000484178 MRPL46Q9H2W6 279 aaKnown RBP4.79□□□□□ -1.64
SSBP1-211ENST00000484178 ASB7Q9H672 318 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF696Q9H7X3 374 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 SMURF2Q9HAU4 748 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 NECTIN3Q9NQS3 549 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 CISHQ9NSE2 258 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 TBCCD1Q9NVR7 557 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 FOXJ2Q9P0K8 574 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 IGSF9Q9P2J2 1179 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 TXNDC16Q9P2K2 825 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF70Q9UC06 446 aaPredicted RBP4.79□□□□□ -1.64
SSBP1-211ENST00000484178 STK39Q9UEW8 545 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 RGS17Q9UGC6 210 aaPredicted RBP4.79□□□□□ -1.64
SSBP1-211ENST00000484178 FBXO40Q9UH90 709 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 PSMD13Q9UNM6 376 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 MED16Q9Y2X0 877 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 TTLL3Q9Y4R7 772 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 TAF1LQ8IZX4 1826 aa4.79□□□□□ -1.64
SSBP1-211ENST00000484178 NRXN2Q9P2S2 1712 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TAF1P21675 1872 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 IGKV6D-21A0A0A0MT36 114 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 FAM234BA2RU67 622 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TRIM49D1C9J1S8 452 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 C19orf81C9J6K1 198 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 F5H0A9 414 aaPredicted RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 F8VP50 259 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 H0Y3Z8 333 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 H7C0C1 242 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 DDX39AO00148 427 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PSMD3O43242 534 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TMCC2O75069 709 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 LRCH4O75427 683 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TADA2AO75478 443 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SOAT2O75908 522 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 STBD1O95210 358 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 MATN4O95460 622 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 VNN1O95497 513 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 STAMBPO95630 424 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 CCNE2O96020 404 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 KRT10P13645 584 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 KCNA2P16389 499 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 HOXB6P17509 224 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 VCLP18206 1134 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PGAM1P18669 254 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 GPD1P21695 349 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 BGNP21810 368 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 YY1P25490 414 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SSTR1P30872 391 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 ATP5OP48047 213 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 HARS2P49590 506 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TUBP50607 506 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 NR1H2P55055 460 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 AQP5P55064 265 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 POLE2P56282 527 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 ACTR2P61160 394 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 NAA20P61599 178 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PSMC1P62191 440 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 RPS6P62753 249 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PRKCEQ02156 737 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 BST1Q10588 318 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 CDC16Q13042 620 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 KRT81Q14533 505 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 CHI3L2Q15782 390 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TIGD6Q17RP2 521 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF699Q32M78 642 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 KBTBD12Q3ZCT8 623 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 MMEL1Q495T6 779 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 FLYWCH1Q4VC44 716 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 ZNF667Q5HYK9 610 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 FNBP1LQ5T0N5 605 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 GRTP1Q5TC63 336 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 OGFRL1Q5TC84 451 aaPredicted RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 RINLQ6ZS11 566 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 NEK10Q6ZWH5 1172 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 HERC6Q8IVU3 1022 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 ARID3BQ8IVW6 561 aaPredicted RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 FBXW8Q8N3Y1 598 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 SLC44A3Q8N4M1 653 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PACRGLQ8N7B6 248 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 RBM15BQ8NDT2 890 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 OR6B3Q8NGW1 331 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 RP9Q8TA86 221 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 STYXQ8WUJ0 223 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 PDCD6IPQ8WUM4 868 aaKnown RBP4.78□□□□□ -1.64
SSBP1-211ENST00000484178 NAT14Q8WUY8 206 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 C12orf42Q96LP6 360 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 Q96MF0 132 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 TSNARE1Q96NA8 513 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 BIRC8Q96P09 236 aa4.78□□□□□ -1.64
SSBP1-211ENST00000484178 RNF157Q96PX1 679 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms