RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CNOT3O75175 753 aaKnown RBP12.53□□□□□ -0.4
UBR4-213ENST00000483922 PROSCO94903 275 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 NDST3O95803 873 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 KLK3P07288 261 aaPredicted RBP12.53□□□□□ -0.4
UBR4-213ENST00000483922 CTSBP07858 339 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 MX2P20592 715 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 HMGCLP35914 325 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 CHRNA4P43681 627 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 ARL4DP49703 201 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 GSDMDP57764 484 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 PLCL1Q15111 1095 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 ZRANB3Q5FWF4 1079 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 KLHL35Q6PF15 583 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 KDELC1Q6UW63 502 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 CUZD1Q86UP6 607 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 HPS6Q86YV9 775 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 SYTL1Q8IYJ3 562 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 OR8K5Q8NH50 307 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 GDAP1Q8TB36 358 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 DTX3LQ8TDB6 740 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 BRSK1Q8TDC3 778 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 CPT1BQ92523 772 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 CLIP3Q96DZ5 547 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 OLFM3Q96PB7 478 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 C5AR2Q9P296 337 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 B3GNT3Q9Y2A9 372 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 HEY1Q9Y5J3 304 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 DNMT3AQ9Y6K1 912 aaPredicted RBP12.53□□□□□ -0.4
UBR4-213ENST00000483922 POLQO75417 2590 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 POLEQ07864 2286 aa12.53□□□□□ -0.4
UBR4-213ENST00000483922 A0A1B0GTH6 734 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 BTN3A3O00478 584 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 PMPCBO75439 489 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 CBSLP0DN79 551 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 ST6GAL1P15907 406 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 VCLP18206 1134 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 CBSP35520 551 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 AP1B1Q10567 949 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 NR1I3Q14994 352 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 NCF4Q15080 339 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 HADHQ16836 314 aaKnown RBP12.52□□□□□ -0.41
UBR4-213ENST00000483922 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 GPRC6AQ5T6X5 926 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 SLC9A4Q6AI14 798 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 FAM151BQ6UXP7 276 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 MICALCLQ6ZW33 695 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 IQCKQ8N0W5 287 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 TTC13Q8NBP0 860 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 OR4E2Q8NGC2 313 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 KIR3DX1Q9H7L2 352 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 CBX8Q9HC52 389 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 PIKFYVEQ9Y2I7 2098 aa12.52□□□□□ -0.41
UBR4-213ENST00000483922 PVRP15151 417 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 ELAVL4P26378 380 aaKnown RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 VARSP26640 1264 aaKnown RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 PBLDP30039 288 aaPredicted RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 PRDX3P30048 256 aaKnown RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 OTX2P32243 289 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 LMAN1P49257 510 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 XRCC4Q13426 336 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 GTF2H3Q13889 308 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 SLC14A2Q15849 920 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 STX1AQ16623 288 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 SIRPB2Q5JXA9 342 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 FNBP1LQ5T0N5 605 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 CLEC17AQ6ZS10 378 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 Q6ZS92 163 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 DET1Q7L5Y6 550 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 MRGPREQ86SM8 312 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 DAAM2Q86T65 1068 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 KCNMB4Q86W47 210 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 OOSP2Q86WS3 158 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 GALNT16Q8N428 558 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 DDHD1Q8NEL9 900 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 MRGPRX2Q96LB1 330 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 RMDN2Q96LZ7 410 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 C12orf66Q96MD2 445 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 TTC25Q96NG3 672 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 PACSIN1Q9BY11 444 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 UNKQ9C0B0 810 aaKnown RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 XPO4Q9C0E2 1151 aaKnown RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 KLHL25Q9H0H3 589 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 ACTR5Q9H9F9 607 aaPredicted RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 FAM60AQ9NP50 221 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 C1GALT1Q9NS00 363 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 HAUS2Q9NVX0 235 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 SOHLH2Q9NX45 425 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 POMT2Q9UKY4 750 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 COPG1Q9Y678 874 aaKnown RBP12.51□□□□□ -0.41
UBR4-213ENST00000483922 NF1P21359 2839 aa12.51□□□□□ -0.41
UBR4-213ENST00000483922 FER1L5A0AVI2 2057 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 MGAT4DA6NG13 374 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 TMEM150CB9EJG8 249 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 E2F3O00716 465 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms