RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 MAB21L3Q8N8X9 362 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 KCNH5Q8NCM2 988 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 MCUQ8NE86 351 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 PRPF31Q8WWY3 499 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 ERGIC1Q969X5 290 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 RRNAD1Q96FB5 475 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 ELMOD3Q96FG2 381 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 NUDCD1Q96RS6 583 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 SEPT5Q99719 369 aaPredicted RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 FAM110AQ9BQ89 295 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 TUBA1CQ9BQE3 449 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 OSGEPL1Q9H4B0 414 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 PLK3Q9H4B4 646 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 SLC28A3Q9HAS3 691 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 TAB2Q9NYJ8 693 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 CISD1Q9NZ45 108 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 CWC15Q9P013 229 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 SLC9A2Q9UBY0 812 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 R3HDM2Q9Y2K5 976 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 TNRC6CQ9HCJ0 1690 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 ARFGEF1Q9Y6D6 1849 aa3.67□□□□□ -1.82
GTF3A-207ENST00000482655 ATXN2Q99700 1313 aaKnown RBP3.67□□□□□ -1.82
GTF3A-207ENST00000482655 ADAMTS7Q9UKP4 1686 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 ITGB4P16144 1822 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 A0A0G2JLW4 131 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 TMEM202A6NGA9 273 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 SH2B2O14492 632 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 KLK8O60259 260 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 ENTPD3O75355 529 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 DAB1O75553 588 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 JRKO75564 520 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 CSPG5O95196 566 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 CLDN14O95500 239 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 IL11P20809 199 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 TCEA1P23193 301 aaKnown RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 STX2P32856 288 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 PRCPP42785 496 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 MATR3P43243 847 aaKnown RBP eCLIP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 RGS19P49795 217 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 STAT2P52630 851 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 ILF3Q12906 894 aaKnown RBP eCLIP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 AMZ1Q400G9 498 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 KIAA0930Q6ICG6 404 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 FBXO46Q6PJ61 603 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 GDPD4Q6W3E5 623 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 CCNI2Q6ZMN8 369 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 WDR63Q8IWG1 891 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 SLC35F3Q8IY50 421 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 SYT2Q8N9I0 419 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 SORCS1Q8WY21 1168 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 SNAPC3Q92966 411 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 SLC41A2Q96JW4 573 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 CSF3RQ99062 836 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 PCGF1Q9BSM1 259 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 C1QTNF5Q9BXJ0 243 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 MRPL1Q9BYD6 325 aaKnown RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 TKTL2Q9H0I9 626 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 HRH4Q9H3N8 390 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 NDST4Q9H3R1 872 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 RABEP2Q9H5N1 569 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 UBTD1Q9HAC8 227 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 NOX4Q9NPH5 578 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 GPR108Q9NPR9 543 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 ARHGEF38Q9NXL2 777 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 PSD3Q9NYI0 1048 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 MARCH4Q9P2E8 410 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 CMAHPQ9Y471 501 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 MAGED1Q9Y5V3 778 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 FAM169AQ9Y6X4 670 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 KDM6AO15550 1401 aaPredicted RBP3.66□□□□□ -1.82
GTF3A-207ENST00000482655 NSD3Q9BZ95 1437 aa3.66□□□□□ -1.82
GTF3A-207ENST00000482655 GLOD5A6NK44 160 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 TSPY2A6NKD2 308 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 H3BQ06 376 aaPredicted RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 PGM3O95394 542 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 SP1P08047 785 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 TSPY3P0CV98 308 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 TSPY8P0CW00 308 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 DPEP1P16444 411 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 DDX5P17844 614 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 PON1P27169 355 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 EEF1DP29692 281 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 HNRNPH1P31943 449 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 LIG4P49917 911 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 RAD23BP54727 409 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 MRPS5P82675 430 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 MRPS34P82930 218 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 TSPY1Q01534 308 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 AIMP1Q12904 312 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 CDC16Q13042 620 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 ITPK1Q13572 414 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 OASLQ15646 514 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 SGO1Q5FBB7 561 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 SPECC1Q5M775 1068 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 GARNL3Q5VVW2 1013 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 SIGIRRQ6IA17 410 aa3.65□□□□□ -1.83
GTF3A-207ENST00000482655 METTL2BQ6P1Q9 378 aaKnown RBP3.65□□□□□ -1.83
GTF3A-207ENST00000482655 QSOX2Q6ZRP7 698 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms