RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 FBP2O00757 339 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 INPPL1O15357 1258 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 SMAD6O43541 496 aaKnown RBP9.01□□□□□ -0.97
CALD1-220ENST00000482470 MTHFRP42898 656 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 PRIM2P49643 509 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 XKR6Q5GH73 641 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 RNF168Q8IYW5 571 aaPredicted RBP9.01□□□□□ -0.97
CALD1-220ENST00000482470 VPS37AQ8NEZ2 397 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 ING5Q8WYH8 240 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 CENPNQ96H22 339 aaPredicted RBP9.01□□□□□ -0.97
CALD1-220ENST00000482470 PANX1Q96RD7 426 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 MTERF1Q99551 399 aaKnown RBP9.01□□□□□ -0.97
CALD1-220ENST00000482470 EMILIN2Q9BXX0 1053 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 UGT2B28Q9BY64 529 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 ARMC7Q9H6L4 198 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 ARNT2Q9HBZ2 717 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 RNF11Q9Y3C5 154 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 PCDHB1Q9Y5F3 818 aa9.01□□□□□ -0.97
CALD1-220ENST00000482470 LOC285095A0A1B0GVY8 99 aa9□□□□□ -0.97
CALD1-220ENST00000482470 A0A1W2PP18 115 aa9□□□□□ -0.97
CALD1-220ENST00000482470 RFXANKO14593 260 aa9□□□□□ -0.97
CALD1-220ENST00000482470 DSC1Q08554 894 aa9□□□□□ -0.97
CALD1-220ENST00000482470 MAD2L1Q13257 205 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 OGFRL1Q5TC84 451 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 GRAMD4Q6IC98 578 aa9□□□□□ -0.97
CALD1-220ENST00000482470 ABRAXAS1Q6UWZ7 409 aa9□□□□□ -0.97
CALD1-220ENST00000482470 LIMS2Q7Z4I7 341 aa9□□□□□ -0.97
CALD1-220ENST00000482470 GOLGA7Q7Z5G4 137 aa9□□□□□ -0.97
CALD1-220ENST00000482470 GPR180Q86V85 440 aa9□□□□□ -0.97
CALD1-220ENST00000482470 C11orf74Q86VG3 221 aa9□□□□□ -0.97
CALD1-220ENST00000482470 RETREG3Q86VR2 466 aa9□□□□□ -0.97
CALD1-220ENST00000482470 UBXN10Q96LJ8 280 aa9□□□□□ -0.97
CALD1-220ENST00000482470 CREBZFQ9NS37 354 aa9□□□□□ -0.97
CALD1-220ENST00000482470 NUDT4Q9NZJ9 180 aa9□□□□□ -0.97
CALD1-220ENST00000482470 TBC1D30Q9Y2I9 924 aa9□□□□□ -0.97
CALD1-220ENST00000482470 NUP214P35658 2090 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 CENPFP49454 3210 aa9□□□□□ -0.97
CALD1-220ENST00000482470 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 DYTNA2CJ06 578 aa9□□□□□ -0.97
CALD1-220ENST00000482470 FKTNO75072 461 aa9□□□□□ -0.97
CALD1-220ENST00000482470 SEC24AO95486 1093 aa9□□□□□ -0.97
CALD1-220ENST00000482470 MYCLP1P12525 358 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 POLR2EP19388 210 aaKnown RBP9□□□□□ -0.97
CALD1-220ENST00000482470 POU1F1P28069 291 aa9□□□□□ -0.97
CALD1-220ENST00000482470 RPS9P46781 194 aaKnown RBP9□□□□□ -0.97
CALD1-220ENST00000482470 OCA2Q04671 838 aa9□□□□□ -0.97
CALD1-220ENST00000482470 SIM2Q14190 667 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 CBX2Q14781 532 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 ARHGAP15Q53QZ3 475 aa9□□□□□ -0.97
CALD1-220ENST00000482470 MANEALQ5VSG8 457 aa9□□□□□ -0.97
CALD1-220ENST00000482470 Q6ZVU0 165 aa9□□□□□ -0.97
CALD1-220ENST00000482470 NECAB2Q7Z6G3 386 aa9□□□□□ -0.97
CALD1-220ENST00000482470 TSPAN33Q86UF1 283 aa9□□□□□ -0.97
CALD1-220ENST00000482470 TBC1D21Q8IYX1 336 aa9□□□□□ -0.97
CALD1-220ENST00000482470 PHACTR4Q8IZ21 702 aa9□□□□□ -0.97
CALD1-220ENST00000482470 EID3Q8N140 333 aa9□□□□□ -0.97
CALD1-220ENST00000482470 TNIP2Q8NFZ5 429 aa9□□□□□ -0.97
CALD1-220ENST00000482470 ISL2Q96A47 359 aa9□□□□□ -0.97
CALD1-220ENST00000482470 IGSF21Q96ID5 467 aa9□□□□□ -0.97
CALD1-220ENST00000482470 SLC22A12Q96S37 553 aa9□□□□□ -0.97
CALD1-220ENST00000482470 RANBP9Q96S59 729 aa9□□□□□ -0.97
CALD1-220ENST00000482470 RSL24D1Q9UHA3 163 aaKnown RBP9□□□□□ -0.97
CALD1-220ENST00000482470 TDRKHQ9Y2W6 561 aaKnown RBP9□□□□□ -0.97
CALD1-220ENST00000482470 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
CALD1-220ENST00000482470 H6PDO95479 791 aa9□□□□□ -0.97
CALD1-220ENST00000482470 IGLV3-25P01717 112 aa9□□□□□ -0.97
CALD1-220ENST00000482470 C8AP07357 584 aa9□□□□□ -0.97
CALD1-220ENST00000482470 HOXD9P28356 352 aaPredicted RBP9□□□□□ -0.97
CALD1-220ENST00000482470 SLC26A3P40879 764 aa9□□□□□ -0.97
CALD1-220ENST00000482470 NAE1Q13564 534 aa9□□□□□ -0.97
CALD1-220ENST00000482470 LAPTM4AQ15012 233 aa9□□□□□ -0.97
CALD1-220ENST00000482470 PAGE3Q5JUK9 113 aa9□□□□□ -0.97
CALD1-220ENST00000482470 SPANXN4Q5MJ08 99 aa9□□□□□ -0.97
CALD1-220ENST00000482470 NANOGP8Q6NSW7 305 aa9□□□□□ -0.97
CALD1-220ENST00000482470 LARP4Q71RC2 724 aaKnown RBP eCLIP9□□□□□ -0.97
CALD1-220ENST00000482470 BBS7Q8IWZ6 715 aa9□□□□□ -0.97
CALD1-220ENST00000482470 TMEM132CQ8N3T6 1108 aa9□□□□□ -0.97
CALD1-220ENST00000482470 SCAMP4Q969E2 229 aa9□□□□□ -0.97
CALD1-220ENST00000482470 ROGDIQ9GZN7 287 aa9□□□□□ -0.97
CALD1-220ENST00000482470 NANOGQ9H9S0 305 aa9□□□□□ -0.97
CALD1-220ENST00000482470 TLR9Q9NR96 1032 aa9□□□□□ -0.97
CALD1-220ENST00000482470 EXD2Q9NVH0 621 aa9□□□□□ -0.97
CALD1-220ENST00000482470 SNX8Q9Y5X2 465 aa9□□□□□ -0.97
CALD1-220ENST00000482470 MMP2P08253 660 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 DNAJB1P25685 340 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 HNF4AP41235 474 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 ALDH9A1P49189 494 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 AP1S1P61966 158 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 IRF5Q13568 498 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 RFTN1Q14699 578 aaPredicted RBP8.99□□□□□ -0.97
CALD1-220ENST00000482470 KLHDC10Q6PID8 442 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 P3H2Q8IVL5 708 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 TAGAPQ8N103 731 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 SLC13A3Q8WWT9 602 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 WRAP53Q9BUR4 548 aaKnown RBP8.99□□□□□ -0.97
CALD1-220ENST00000482470 BRD9Q9H8M2 597 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 SLCO3A1Q9UIG8 710 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 SNX6Q9UNH7 406 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 USP22Q9UPT9 525 aa8.99□□□□□ -0.97
CALD1-220ENST00000482470 H3BNX3 289 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms