RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 CFAP206Q8IYR0 622 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 TAB3Q8N5C8 712 aaPredicted RBP18.12■□□□□ 0.49
CLK1-211ENST00000481641 FAM71DQ8N9W8 422 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 SIDT2Q8NBJ9 832 aaKnown RBP18.12■□□□□ 0.49
CLK1-211ENST00000481641 STAMBPL1Q96FJ0 436 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 DCUN1D1Q96GG9 259 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 SLC41A2Q96JW4 573 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 PPM1MQ96MI6 270 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 DESI2Q9BSY9 194 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 PIH1D1Q9NWS0 290 aaKnown RBP18.12■□□□□ 0.49
CLK1-211ENST00000481641 HRASLS2Q9NWW9 162 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 SEMA5BQ9P283 1151 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 AMFRQ9UKV5 643 aa18.12■□□□□ 0.49
CLK1-211ENST00000481641 R3HDM2Q9Y2K5 976 aaKnown RBP18.12■□□□□ 0.49
CLK1-211ENST00000481641 TCRBV7S2A1N4TA0A589 114 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 OR6C74A6NCV1 312 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 OR5K3A6NET4 321 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 AGAP14A8MT82 685 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 TERTO14746 1132 aaKnown RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 DDX3YO15523 660 aaKnown RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 LDB2O43679 373 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 KATNA1O75449 491 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 METTL18O95568 372 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 FTCDO95954 541 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 FURINP09958 794 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 KCNC4Q03721 635 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 TUBB3Q13509 450 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 GSE1Q14687 1217 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLK1-211ENST00000481641 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 PWWP2BQ6NUJ5 590 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 PEX26Q7Z412 305 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 TMEM139Q8IV31 216 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 NXPE1Q8N323 547 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 UBXN4Q92575 508 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 DNAJC1Q96KC8 554 aaKnown RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 NRTNQ99748 197 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 BAG1Q99933 345 aaPredicted RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 CLMPQ9H6B4 373 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 AKIRIN1Q9H9L7 192 aaPredicted RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 ZNF71Q9NQZ8 489 aaPredicted RBP18.11■□□□□ 0.49
CLK1-211ENST00000481641 SLC24A2Q9UI40 661 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 ACSL5Q9ULC5 683 aa18.11■□□□□ 0.49
CLK1-211ENST00000481641 UBA6A0AVT1 1052 aaPredicted RBP18.1■□□□□ 0.49
CLK1-211ENST00000481641 PTMAP06454 111 aaKnown RBP18.1■□□□□ 0.49
CLK1-211ENST00000481641 SLC35G4P0C7Q5 338 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 ITGALP20701 1170 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 MC4RP32245 332 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 GDF10P55107 478 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 ERV3-1Q14264 604 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 KCTD11Q693B1 232 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 CAPRIN2Q6IMN6 1127 aaKnown RBP18.1■□□□□ 0.49
CLK1-211ENST00000481641 KLHL35Q6PF15 583 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 ARHGEF18Q6ZSZ5 1173 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 SNX20Q7Z614 316 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 TMEM135Q86UB9 458 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 KLHDC8BQ8IXV7 354 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 ULK4Q96C45 1275 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 LINC00615Q96LM1 132 aaPredicted RBP18.1■□□□□ 0.49
CLK1-211ENST00000481641 RUFY1Q96T51 708 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 COPS8Q99627 209 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 ARNT2Q9HBZ2 717 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 PDE7BQ9NP56 450 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 RARRES3Q9UL19 164 aa18.1■□□□□ 0.49
CLK1-211ENST00000481641 CCDC78A2IDD5 438 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 GOLGA6L3A6NEY3 463 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 NTRK1P04629 796 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 RALBP11234 206 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 ATP1B2P14415 290 aaPredicted RBP18.09■□□□□ 0.49
CLK1-211ENST00000481641 POLR2CP19387 275 aaPredicted RBP18.09■□□□□ 0.49
CLK1-211ENST00000481641 PRLHRP49683 370 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 ARL4DP49703 201 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 KPNA2P52292 529 aaKnown RBP18.09■□□□□ 0.49
CLK1-211ENST00000481641 PDE1BQ01064 536 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 MC1RQ01726 317 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 SEPT6Q14141 434 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 GPR19Q15760 415 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 SKIDA1Q1XH10 827 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 PARP6Q2NL67 630 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 ZRANB3Q5FWF4 1079 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 COLEC12Q5KU26 742 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 OOSP2Q86WS3 158 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 OR4E2Q8NGC2 313 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 CT55Q8WUE5 264 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 APOBEC4Q8WW27 367 aaKnown RBP18.09■□□□□ 0.49
CLK1-211ENST00000481641 TMEM121Q9BTD3 319 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 KIR3DX1Q9H7L2 352 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 PADI1Q9ULC6 663 aa18.09■□□□□ 0.49
CLK1-211ENST00000481641 SPTBP11277 2137 aa18.08■□□□□ 0.49
CLK1-211ENST00000481641 GOLGA6L9A6NEM1 432 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 TLCD2A6NGC4 264 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 CCNYL3P0C7X3 344 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 HADHAP40939 763 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 KLF1Q13351 362 aaPredicted RBP18.08■□□□□ 0.48
CLK1-211ENST00000481641 KRT33BQ14525 404 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 POU6F1Q14863 301 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 FAM199XQ6PEV8 388 aaPredicted RBP18.08■□□□□ 0.48
CLK1-211ENST00000481641 TAS2R42Q7RTR8 314 aa18.08■□□□□ 0.48
CLK1-211ENST00000481641 SERPINA9Q86WD7 417 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms