RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 ZNF670Q9BS34 389 aa16.89■□□□□ 0.29
RXRB-203ENST00000481441 HSD3B7Q9H2F3 369 aa16.89■□□□□ 0.29
RXRB-203ENST00000481441 ZNF552Q9H707 407 aaPredicted RBP16.89■□□□□ 0.29
RXRB-203ENST00000481441 ACTR5Q9H9F9 607 aaPredicted RBP16.89■□□□□ 0.29
RXRB-203ENST00000481441 FANCEQ9HB96 536 aa16.89■□□□□ 0.29
RXRB-203ENST00000481441 IP6K2Q9UHH9 426 aa16.89■□□□□ 0.29
RXRB-203ENST00000481441 SLC24A2Q9UI40 661 aa16.89■□□□□ 0.29
RXRB-203ENST00000481441 SPO11Q9Y5K1 396 aa16.89■□□□□ 0.29
RXRB-203ENST00000481441 CFAP20Q9Y6A4 193 aaKnown RBP16.89■□□□□ 0.29
RXRB-203ENST00000481441 SVILO95425 2214 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 SLC9B1P1A6NJY1 282 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 AURKAO14965 403 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 LRRTM2O43300 516 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 KLF7O75840 302 aaPredicted RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 ALPPP05187 535 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 CDK11BP21127 795 aaKnown RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 OTX2P32243 289 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 ARCN1P48444 511 aaKnown RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 MYL5Q02045 173 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 XRCC4Q13426 336 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 NAA30Q147X3 362 aaPredicted RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 ZRSR2Q15696 482 aaKnown RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 DUS1LQ6P1R4 473 aaKnown RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 SPOCD1Q6ZMY3 1216 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 Q6ZS92 163 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 CUZD1Q86UP6 607 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 ZFPM2Q8WW38 1151 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 TADA1Q96BN2 335 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 FAF2Q96CS3 445 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 IP6K3Q96PC2 410 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 INSM2Q96T92 566 aaPredicted RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 BPIFA1Q9NP55 256 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 ANAPC7Q9UJX3 599 aa16.88■□□□□ 0.29
RXRB-203ENST00000481441 DNMT3AQ9Y6K1 912 aaPredicted RBP16.88■□□□□ 0.29
RXRB-203ENST00000481441 PCM1Q15154 2024 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 PDZD2O15018 2839 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 ANKRD12Q6UB98 2062 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 MSL3P1P0C860 447 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 HADHAP40939 763 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 GLRBP48167 497 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 PER3P56645 1201 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 PPIDQ08752 370 aaKnown RBP16.87■□□□□ 0.29
RXRB-203ENST00000481441 KLHL30Q0D2K2 578 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 PCSK7Q16549 785 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 DCAF10Q5QP82 559 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 METRNLQ641Q3 311 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 ZNF385CQ66K41 422 aaPredicted RBP16.87■□□□□ 0.29
RXRB-203ENST00000481441 HGSNATQ68CP4 663 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 SP5Q6BEB4 398 aaPredicted RBP16.87■□□□□ 0.29
RXRB-203ENST00000481441 KCNMB4Q86W47 210 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 GALNT16Q8N428 558 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 CLEC1AQ8NC01 280 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 FER1L6-AS2Q96M78 137 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 DPH2Q9BQC3 489 aaPredicted RBP16.87■□□□□ 0.29
RXRB-203ENST00000481441 DHRS4Q9BTZ2 278 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 THAP2Q9H0W7 228 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 KIR3DX1Q9H7L2 352 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 ZBTB20Q9HC78 741 aaPredicted RBP16.87■□□□□ 0.29
RXRB-203ENST00000481441 SYTL2Q9HCH5 934 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 IL26Q9NPH9 171 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 POMT2Q9UKY4 750 aa16.87■□□□□ 0.29
RXRB-203ENST00000481441 DOCK10Q96BY6 2186 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 SMTNL1A8MU46 457 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 TMEM150CB9EJG8 249 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 CYP2A7P20853 494 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 SSR1P43307 286 aaKnown RBP16.86■□□□□ 0.29
RXRB-203ENST00000481441 ADCY2Q08462 1091 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 PDK2Q15119 407 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 LLGL1Q15334 1064 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 HADHQ16836 314 aaKnown RBP16.86■□□□□ 0.29
RXRB-203ENST00000481441 TMEM220Q6QAJ8 160 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 NT5DC3Q86UY8 548 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 CPNE8Q86YQ8 564 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 MCEMP1Q8IX19 187 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 ZADH2Q8N4Q0 377 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 KCTD6Q8NC69 237 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 DTX3LQ8TDB6 740 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 TM9SF4Q92544 642 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 SRPK1Q96SB4 655 aaKnown RBP16.86■□□□□ 0.29
RXRB-203ENST00000481441 ZCCHC2Q9C0B9 1178 aaKnown RBP16.86■□□□□ 0.29
RXRB-203ENST00000481441 WWP1Q9H0M0 922 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 C1GALT1Q9NS00 363 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 PADI2Q9Y2J8 665 aa16.86■□□□□ 0.29
RXRB-203ENST00000481441 CNTRLQ7Z7A1 2325 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 OR2AG2A6NM03 316 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 C9J4A7 227 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 GOLGA6L19H0YKK7 550 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 E2F3O00716 465 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 KLHL41O60662 606 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 IPO13O94829 963 aaKnown RBP16.85■□□□□ 0.29
RXRB-203ENST00000481441 NDST3O95803 873 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 SKILP12757 684 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 POLR2CP19387 275 aaPredicted RBP16.85■□□□□ 0.29
RXRB-203ENST00000481441 HLA-DPA1P20036 260 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 CDH3P22223 829 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 HMGCLP35914 325 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 GJC1P36383 396 aa16.85■□□□□ 0.29
RXRB-203ENST00000481441 PREPP48147 710 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms