RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 SLCO2B1O94956 709 aa11□□□□□ -0.65
APTX-223ENST00000479656 APBB3O95704 486 aa11□□□□□ -0.65
APTX-223ENST00000479656 FUCA1P04066 466 aa11□□□□□ -0.65
APTX-223ENST00000479656 MYCLP1P12525 358 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 ENO3P13929 434 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 GFAPP14136 432 aa11□□□□□ -0.65
APTX-223ENST00000479656 IMPDH1P20839 514 aa11□□□□□ -0.65
APTX-223ENST00000479656 HNRNPA2B1P22626 353 aaKnown RBP11□□□□□ -0.65
APTX-223ENST00000479656 CCR10P46092 362 aa11□□□□□ -0.65
APTX-223ENST00000479656 PREPP48147 710 aa11□□□□□ -0.65
APTX-223ENST00000479656 TGFBIQ15582 683 aa11□□□□□ -0.65
APTX-223ENST00000479656 PLA2G4EQ3MJ16 856 aa11□□□□□ -0.65
APTX-223ENST00000479656 SYTL3Q4VX76 610 aa11□□□□□ -0.65
APTX-223ENST00000479656 FBXO48Q5FWF7 155 aa11□□□□□ -0.65
APTX-223ENST00000479656 KIAA0895LQ68EN5 471 aa11□□□□□ -0.65
APTX-223ENST00000479656 SBSNQ6UWP8 590 aa11□□□□□ -0.65
APTX-223ENST00000479656 RPS27LQ71UM5 84 aaKnown RBP11□□□□□ -0.65
APTX-223ENST00000479656 C11orf96Q7Z7L8 435 aa11□□□□□ -0.65
APTX-223ENST00000479656 SLC22A9Q8IVM8 553 aa11□□□□□ -0.65
APTX-223ENST00000479656 PTGR2Q8N8N7 351 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 TMEM159Q96B96 161 aa11□□□□□ -0.65
APTX-223ENST00000479656 LINC00615Q96LM1 132 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 TMEM237Q96Q45 408 aa11□□□□□ -0.65
APTX-223ENST00000479656 FAM126AQ9BYI3 521 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 CD274Q9NZQ7 290 aa11□□□□□ -0.65
APTX-223ENST00000479656 ZNHIT2Q9UHR6 403 aa11□□□□□ -0.65
APTX-223ENST00000479656 INVSQ9Y283 1065 aa11□□□□□ -0.65
APTX-223ENST00000479656 IGHV1OR15-9A0A0B4J2B8 117 aa11□□□□□ -0.65
APTX-223ENST00000479656 LRRC14BA6NHZ5 514 aa11□□□□□ -0.65
APTX-223ENST00000479656 C10orf142B7Z368 130 aa11□□□□□ -0.65
APTX-223ENST00000479656 H0Y8X5 98 aa11□□□□□ -0.65
APTX-223ENST00000479656 EIF3FO00303 357 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 FPGTO14772 594 aa11□□□□□ -0.65
APTX-223ENST00000479656 GRID2O43424 1007 aa11□□□□□ -0.65
APTX-223ENST00000479656 LATO43561 262 aa11□□□□□ -0.65
APTX-223ENST00000479656 H2AFYO75367 372 aaKnown RBP11□□□□□ -0.65
APTX-223ENST00000479656 SIX3O95343 332 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 PDGFBP01127 241 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 IGHV4-34P06331 123 aa11□□□□□ -0.65
APTX-223ENST00000479656 MPC1LP0DKB6 136 aa11□□□□□ -0.65
APTX-223ENST00000479656 KITP10721 976 aa11□□□□□ -0.65
APTX-223ENST00000479656 PDHA2P29803 388 aa11□□□□□ -0.65
APTX-223ENST00000479656 CXCL12P48061 93 aa11□□□□□ -0.65
APTX-223ENST00000479656 ASPHQ12797 758 aa11□□□□□ -0.65
APTX-223ENST00000479656 ABRQ12979 859 aa11□□□□□ -0.65
APTX-223ENST00000479656 ZNF658BQ4V348 819 aaPredicted RBP11□□□□□ -0.65
APTX-223ENST00000479656 FRA10AC1Q70Z53 315 aa11□□□□□ -0.65
APTX-223ENST00000479656 ADAMTSL2Q86TH1 951 aa11□□□□□ -0.65
APTX-223ENST00000479656 FBXO39Q8N4B4 442 aa11□□□□□ -0.65
APTX-223ENST00000479656 BIRC7Q96CA5 298 aa11□□□□□ -0.65
APTX-223ENST00000479656 GRAMD1AQ96CP6 724 aa11□□□□□ -0.65
APTX-223ENST00000479656 C7orf26Q96N11 449 aa11□□□□□ -0.65
APTX-223ENST00000479656 SORT1Q99523 831 aa11□□□□□ -0.65
APTX-223ENST00000479656 DRC3Q9H069 523 aa11□□□□□ -0.65
APTX-223ENST00000479656 TM7SF3Q9NS93 570 aa11□□□□□ -0.65
APTX-223ENST00000479656 SLC23A2Q9UGH3 650 aa11□□□□□ -0.65
APTX-223ENST00000479656 MOSPD1Q9UJG1 213 aa11□□□□□ -0.65
APTX-223ENST00000479656 C17orf113A0A1B0GUU1 675 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CCDC189A1A4V9 331 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 MGAT4DA6NG13 374 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 TMEM114B3SHH9 223 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CACNB4O00305 520 aaPredicted RBP10.99□□□□□ -0.65
APTX-223ENST00000479656 KLK8O60259 260 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 SNX3O60493 162 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 SUPT7LO94864 414 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 HSPA4LO95757 839 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 GUCA1CO95843 209 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CEACAM5P06731 702 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CHRNGP07510 517 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CCR5P51681 352 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 ARHGAP8P85298 464 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 NFKB2Q00653 900 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 NFE2L1Q14494 772 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 PHKG1Q16816 387 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 PPP1R3AQ16821 1122 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 UNC50Q53HI1 259 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 ARL13AQ5H913 290 aaPredicted RBP10.99□□□□□ -0.65
APTX-223ENST00000479656 CFAP157Q5JU67 520 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 ZNF678Q5SXM1 525 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 GKAP1Q5VSY0 366 aaPredicted RBP10.99□□□□□ -0.65
APTX-223ENST00000479656 XKR5Q6UX68 686 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 UBE2R2Q712K3 238 aaPredicted RBP10.99□□□□□ -0.65
APTX-223ENST00000479656 LRRTM4Q86VH4 590 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CRLF3Q8IUI8 442 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 LSMEM2Q8N112 164 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CAMKK1Q8N5S9 505 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 DEFB119Q8N690 84 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 DENND6BQ8NEG7 585 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 OR2L2Q8NH16 312 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 CFAP61Q8NHU2 1237 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 ASB11Q8WXH4 323 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 ESAMQ96AP7 390 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 SEC16BQ96JE7 1060 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 SHCBP1LQ9BZQ2 653 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 COG4Q9H9E3 785 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 MRPL40Q9NQ50 206 aaKnown RBP10.99□□□□□ -0.65
APTX-223ENST00000479656 OARD1Q9Y530 152 aa10.99□□□□□ -0.65
APTX-223ENST00000479656 LIN7AO14910 233 aaPredicted RBP10.98□□□□□ -0.65
APTX-223ENST00000479656 FFAR2O15552 330 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms