RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 LGALS12Q96DT0 336 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 SPATA13Q96N96 652 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 CITED4Q96RK1 184 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 CCDC32Q9BV29 185 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 NIF3L1Q9GZT8 377 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 LIN7BQ9HAP6 207 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 FBXL12Q9NXK8 326 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 GTSE1Q9NYZ3 720 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 USE1Q9NZ43 259 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 OPTCQ9UBM4 332 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
CNKSR3-204ENST00000479339 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 A0A0G2JMP0 313 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 HACD1B0YJ81 288 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 LOC110117498-PIK3R3F6TDL0 507 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 ANGPT2O15123 496 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 LINC01565O15544 149 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 ARHGEF9O43307 516 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 SNX2O60749 519 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 NOS1APO75052 506 aaPredicted RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 PRKD3O94806 890 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 IL9P15248 144 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 STMN1P16949 149 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 ITGA2P17301 1181 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 HDCP19113 662 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 RPS5P46782 204 aaKnown RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 NRIP1P48552 1158 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 DLX2Q07687 328 aaPredicted RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 INCA1Q0VD86 236 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 DUSP6Q16828 381 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 ZIK1Q3SY52 487 aaPredicted RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 TBPL2Q6SJ96 375 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 PLCZ1Q86YW0 608 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 BLOC1S5Q8TDH9 187 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 SGCDQ92629 289 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 REXO5Q96IC2 774 aaKnown RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 FAM84AQ96KN4 292 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 NXF2Q9GZY0 626 aaKnown RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 KCNN2Q9H2S1 579 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 TOR3AQ9H497 397 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 NARFLQ9H6Q4 476 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 CISHQ9NSE2 258 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 CMTM6Q9NX76 183 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 VPS4AQ9UN37 437 aa12.97□□□□□ -0.33
CNKSR3-204ENST00000479339 MEIS3P2A8K0S8 358 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 INO80B-WBP1J3KQ70 363 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 DLX3O60479 287 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 RYKP34925 604 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 PBX3P40426 434 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 ETV6P41212 452 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 POLD2P49005 469 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 CRADDP78560 199 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 CD47Q08722 323 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 SMAD4Q13485 552 aaKnown RBP12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 GPR50Q13585 617 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 MEP1AQ16819 746 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 OTUD3Q5T2D3 398 aaPredicted RBP12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 SLFN12LQ6IEE8 588 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 NOTUMQ6P988 496 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 TCAIMQ8N3R3 496 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 AMER2Q8N7J2 671 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 FAM83FQ8NEG4 500 aaPredicted RBP12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 LILRB1Q8NHL6 650 aaPredicted RBP12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 PCDH19Q8TAB3 1148 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 MSLNLQ96KJ4 702 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 CYP2S1Q96SQ9 504 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 GPR22Q99680 433 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 ADPGKQ9BRR6 497 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 CCDC90BQ9GZT6 254 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 CD207Q9UJ71 328 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 VANGL2Q9ULK5 521 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 POLHQ9Y253 713 aa12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 SPTBN5Q9NRC6 3674 aaKnown RBP12.96□□□□□ -0.33
CNKSR3-204ENST00000479339 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 TMEM233B4DJY2 109 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 INPPL1O15357 1258 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 GLP2RO95838 553 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 ALOX12P18054 663 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 CES1P23141 567 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 SLC6A2P23975 617 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 ERP29P30040 261 aaKnown RBP12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 EEFSECP57772 596 aaKnown RBP12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 NCS1P62166 190 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 TPRG1LQ5T0D9 272 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 ZNF517Q6ZMY9 492 aaPredicted RBP12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 HDDC2Q7Z4H3 204 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 GALNT7Q86SF2 657 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 RETREG3Q86VR2 466 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 RAB43Q86YS6 212 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 CCNYL1Q8N7R7 359 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 GALNT11Q8NCW6 608 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 ZFAND1Q8TCF1 268 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 TFAP2BQ92481 460 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 CCDC126Q96EE4 140 aa12.96□□□□□ -0.34
CNKSR3-204ENST00000479339 VPS39Q96JC1 886 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms