RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TFB1MQ8WVM0 346 aaKnown RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 RAPGEF5Q92565 580 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SCAMP4Q969E2 229 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 DTNBP1Q96EV8 351 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 RBM41Q96IZ5 413 aaKnown RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 TTC25Q96NG3 672 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 AGAP3Q96P47 875 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SMIM14Q96QK8 99 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 CCT8L2Q96SF2 557 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 CHP1Q99653 195 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 SPATA16Q9BXB7 569 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 SLC25A51Q9H1U9 297 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 ZFYVE1Q9HBF4 777 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 PRDM8Q9NQV8 689 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 FBXO8Q9NRD0 319 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 DTLQ9NZJ0 730 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 TLK1Q9UKI8 766 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 NENFQ9UMX5 172 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.55□□□□□ -1.36
VCP-205ENST00000479300 C15orf41Q9Y2V0 281 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 RPS6KL1Q9Y6S9 549 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 PDZD2O15018 2839 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 POLQO75417 2590 aa6.55□□□□□ -1.36
VCP-205ENST00000479300 A0A0A6YYK5 440 aaPredicted RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 A6NCN8 305 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 OR5K4A6NMS3 321 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ENO4A6NNW6 628 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PSTPIP1O43586 416 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 SNX2O60749 519 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 SORBS2O94875 1100 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 SLC25A14O95258 325 aaPredicted RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 ATP6V1G2O95670 118 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 VCLP18206 1134 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 COMTP21964 271 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 CTNNA2P26232 953 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 MDH1P40925 334 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 MAGEA8P43361 318 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 MAPK9P45984 424 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 FASLGP48023 281 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 SPINT3P49223 89 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PMS2P54278 862 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 EMP3P54852 163 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 GPLD1P80108 840 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ROR2Q01974 943 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 CDK18Q07002 472 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 NIPAL4Q0D2K0 466 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 IFT88Q13099 833 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ERV3-1Q14264 604 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 GALNT3Q14435 633 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ESPL1Q14674 2120 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ASTE1Q2TB18 679 aaPredicted RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 NADK2Q4G0N4 442 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PYCR3Q53H96 274 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 FHL5Q5TD97 284 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 KAZNQ674X7 775 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PDPK2PQ6A1A2 396 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 SLC9A4Q6AI14 798 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 WDR74Q6RFH5 385 aaPredicted RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 LRIG3Q6UXM1 1119 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 LYSMD3Q7Z3D4 306 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 SLC9B2Q86UD5 537 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 TRIM48Q8IWZ4 208 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 RBM12BQ8IXT5 1001 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 RCOR2Q8IZ40 523 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 SFRP1Q8N474 314 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 TEX9Q8N6V9 391 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PQLC3Q8N755 202 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PLD5Q8N7P1 536 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 TEX19Q8NA77 164 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ACRBPQ8NEB7 543 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 GDAP1Q8TB36 358 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ARRDC2Q8TBH0 407 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.54□□□□□ -1.36
VCP-205ENST00000479300 KIAA1143Q96AT1 154 aaPredicted RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 TCTN2Q96GX1 697 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ALS2CR12Q96Q35 445 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 TEFMQ96QE5 360 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 LYSMD1Q96S90 227 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 HERPUD2Q9BSE4 406 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 ZSCAN5AQ9BUG6 496 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 CARD9Q9H257 536 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 OSGEPL1Q9H4B0 414 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 GLOD4Q9HC38 313 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 MAGEE1Q9HCI5 957 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 IRAK4Q9NWZ3 460 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 CHCHD3Q9NX63 227 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.54□□□□□ -1.36
VCP-205ENST00000479300 NOP53Q9NZM5 478 aaKnown RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 KLHL8Q9P2G9 620 aaPredicted RBP6.54□□□□□ -1.36
VCP-205ENST00000479300 CROTQ9UKG9 612 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 MAP4K5Q9Y4K4 846 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 KCTD3Q9Y597 815 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 NF1P21359 2839 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 CELSR1Q9NYQ6 3014 aa6.54□□□□□ -1.36
VCP-205ENST00000479300 PCSK5Q92824 1860 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 C2CD3Q4AC94 2353 aa6.53□□□□□ -1.36
VCP-205ENST00000479300 SETD2Q9BYW2 2564 aaPredicted RBP6.53□□□□□ -1.36
VCP-205ENST00000479300 KIR2DS5A0A0G2JLQ3 304 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms