RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 STPG1Q5TH74 334 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 FAM109BQ6ICB4 259 aaPredicted RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 TMCO3Q6UWJ1 677 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 PLXDC2Q6UX71 529 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 PIWIL4Q7Z3Z4 852 aaKnown RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 SMIM29Q86T20 159 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 NDUFAF2Q8N183 169 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 RBM15BQ8NDT2 890 aaKnown RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 SLC24A4Q8NFF2 622 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 PRPF31Q8WWY3 499 aaKnown RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 UHRF2Q96PU4 802 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 SLC22A12Q96S37 553 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 NODALQ96S42 347 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 TRMT61BQ9BVS5 477 aaKnown RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 MXD3Q9BW11 206 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 SPATC1LQ9H0A9 340 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 MMP28Q9H239 520 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 UPF2Q9HAU5 1272 aaKnown RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 FAM118AQ9NWS6 357 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 LARSQ9P2J5 1176 aaKnown RBP3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 RPS6KA6Q9UK32 745 aa3.73□□□□□ -1.81
SMARCA1-204ENST00000478420 GREB1LQ9C091 1923 aaPredicted RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 NOTCH4Q99466 2003 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 C5orf60A6NFR6 353 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 TSPY2A6NKD2 308 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 H0YIN7 160 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 P2RY10O00398 339 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 GPR137BO60478 399 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 CTSVO60911 334 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 BAG4O95429 457 aaKnown RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 STARD3NLO95772 234 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 TSPY3P0CV98 308 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 TSPY8P0CW00 308 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 GJA1P17302 382 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 TRIM21P19474 475 aaKnown RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 PSMC6P62333 389 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 PHEXP78562 749 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 TSPY1Q01534 308 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 IGSF11Q5DX21 431 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 C9orf50Q5SZB4 431 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 CCNYL2Q5T2Q4 361 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 NDUFAF5Q5TEU4 345 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 ALS2CLQ60I27 953 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 ADALQ6DHV7 355 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 DHRS7BQ6IAN0 325 aaPredicted RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 C19orf48Q6RUI8 117 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 TRMT1LQ7Z2T5 733 aaKnown RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 HAUS6Q7Z4H7 955 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 LDB1Q86U70 411 aaPredicted RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 PTOV1Q86YD1 416 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 CIARTQ8N365 385 aaPredicted RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 APPL2Q8NEU8 664 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 DNASE2BQ8WZ79 361 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 SEMA4DQ92854 862 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 SLC22A18Q96BI1 424 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 SCRN2Q96FV2 425 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 ST6GAL2Q96JF0 529 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 MMP27Q9H306 513 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 KCNK15Q9H427 330 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 HHATLQ9HCP6 504 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 PDE7BQ9NP56 450 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 MIOSQ9NXC5 875 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 CHORDC1Q9UHD1 332 aaPredicted RBP3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 ZNF112Q9UJU3 913 aa3.72□□□□□ -1.81
SMARCA1-204ENST00000478420 A0A1W2PPI3 338 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 ADAMDEC1O15204 470 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 ZWINTO95229 277 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 LDLRP01130 860 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 NNMTP40261 264 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MATR3P43243 847 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 LMAN1P49257 510 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MMP15P51511 669 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 SIRPAP78324 504 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MBTD1Q05BQ5 628 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 WASHC5Q12768 1159 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 PLA2G7Q13093 441 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MELKQ14680 651 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 KIR2DS3Q14952 304 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 GCNT6Q5T4J0 391 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 CFAP58Q5T655 872 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MFSD4BQ5TF39 518 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 KLC3Q6P597 504 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 SLC26A9Q7LBE3 791 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 LINC00346Q8IVM7 164 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 DCUN1D3Q8IWE4 304 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 LRRC8CQ8TDW0 803 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 SECISBP2LQ93073 1101 aaKnown RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 ATP6V1E2Q96A05 226 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 FAM81BQ96LP2 452 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 ZNF582Q96NG8 517 aaPredicted RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 TSPAN18Q96SJ8 248 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 CDRT15Q96T59 188 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 SLX1AQ9BQ83 275 aa3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MOV10L1Q9BXT6 1211 aaKnown RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 MRPL1Q9BYD6 325 aaKnown RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 PPIL3Q9H2H8 161 aaKnown RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 ZNF334Q9HCZ1 680 aaPredicted RBP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMARCA1-204ENST00000478420 SLC38A7Q9NVC3 462 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms