RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 SOX13Q9UN79 622 aa15.25■□□□□ 0.03
HMGA1-206ENST00000478214 A8MU76 341 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 CDRT15L2A8MXV6 281 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 HGSO14964 777 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-206ENST00000478214 KRT37O76014 449 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 UBXN7O94888 489 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 ITGA2BP08514 1039 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 MLNP12872 115 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 CCL4P13236 92 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 AMD1P17707 334 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 ARNTP27540 789 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 PDHA2P29803 388 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 ETV5P41161 510 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 PTGIRP43119 386 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 CAPRIN2Q6IMN6 1127 aaKnown RBP15.24■□□□□ 0.03
HMGA1-206ENST00000478214 KLHL7Q8IXQ5 586 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 NAT8LQ8N9F0 302 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 RSC1A1Q92681 617 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 SLCO2A1Q92959 643 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 TMEM159Q96B96 161 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 SERPINB12Q96P63 405 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 TRIM56Q9BRZ2 755 aaKnown RBP15.24■□□□□ 0.03
HMGA1-206ENST00000478214 XAB2Q9HCS7 855 aaKnown RBP15.24■□□□□ 0.03
HMGA1-206ENST00000478214 KLHL3Q9UH77 587 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 ASIC3Q9UHC3 531 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 ANAPC5Q9UJX4 755 aa15.24■□□□□ 0.03
HMGA1-206ENST00000478214 A0A087WV48 116 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 CD3EAPO15446 510 aaKnown RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 VAPBO95292 243 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 OR56A5P0C7T3 313 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 EIF2S3P41091 472 aaKnown RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 MLLT3P42568 568 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 PREPP48147 710 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 MAPK10P53779 464 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 GFERP55789 205 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 PCBP4P57723 403 aaKnown RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 PTK6Q13882 451 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 AARS2Q5JTZ9 985 aaKnown RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 RNASEH2BQ5TBB1 312 aaKnown RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 CASC4Q6P4E1 433 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 NAPRTQ6XQN6 538 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 CLEC14AQ86T13 490 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 JAMLQ86YT9 394 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 PPIL6Q8IXY8 311 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 AGBL5Q8NDL9 886 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 NAF1Q96HR8 494 aaKnown RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 OR52A5Q9H2C5 316 aa15.23■□□□□ 0.03
HMGA1-206ENST00000478214 AKAP7Q9P0M2 348 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-206ENST00000478214 SDR42E2A6NKP2 422 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 GOLGA8KD6RF30 607 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 GOLGA8TH3BQL2 631 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 QSOX1O00391 747 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 DNALI1O14645 258 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-206ENST00000478214 FTH1P02794 183 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 GSTM1P09488 218 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 CSTF2P33240 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
HMGA1-206ENST00000478214 PPARGP37231 505 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-206ENST00000478214 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 MAGEA3P43357 314 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 GSTM4Q03013 218 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 BRD3Q15059 726 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 C19orf48Q6RUI8 117 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 ARHGAP22Q7Z5H3 698 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 PLXDC1Q8IUK5 500 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 AGGF1Q8N302 714 aaeCLIP15.22■□□□□ 0.03
HMGA1-206ENST00000478214 ZNF248Q8NDW4 579 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 HNRNPLLQ8WVV9 542 aaKnown RBP15.22■□□□□ 0.03
HMGA1-206ENST00000478214 ELMO1Q92556 727 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 FCRL3Q96P31 734 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-206ENST00000478214 SAMD15Q9P1V8 674 aa15.22■□□□□ 0.03
HMGA1-206ENST00000478214 MN1Q10571 1320 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 LIN7AO14910 233 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 CAPN5O15484 640 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 RRP8O43159 456 aaKnown RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 C9P02748 559 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 FGF3P11487 239 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ITGB6P18564 788 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 IVDP26440 423 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ITPKBP27987 946 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 SLC5A2P31639 672 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 CAPZBP47756 277 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 LEPRP48357 1165 aaKnown RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ARCN1P48444 511 aaKnown RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 TTPAP49638 278 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ETF1P62495 437 aaKnown RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 RPA4Q13156 261 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 KRT33BQ14525 404 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 PLCL1Q15111 1095 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ANKRD20A4Q4UJ75 823 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ARMC3Q5W041 872 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 KIAA0930Q6ICG6 404 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ZNF449Q6P9G9 518 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 OTUD6BQ8N6M0 293 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 USP7Q93009 1102 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 ZNF669Q96BR6 464 aaPredicted RBP15.21■□□□□ 0.03
HMGA1-206ENST00000478214 C9orf72Q96LT7 481 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 TGM7Q96PF1 710 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 KIR3DX1Q9H7L2 352 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 OCIAD1Q9NX40 245 aa15.21■□□□□ 0.03
HMGA1-206ENST00000478214 RNF14Q9UBS8 474 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms