RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 GGT5P36269 586 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 LIN52Q52LA3 116 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 RNF220Q5VTB9 566 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 FAM219BQ5XKK7 198 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 HMBOX1Q6NT76 420 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 USP45Q70EL2 814 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 OR52B6Q8NGF0 335 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 PROKR1Q8TCW9 393 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 AUTS2Q8WXX7 1259 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 NCSTNQ92542 709 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 KCTD5Q9NXV2 234 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 IRAK3Q9Y616 596 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 PRSS21Q9Y6M0 314 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 PLXNA2O75051 1894 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SMIM31A0A1B0GVY4 71 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 ANKRD28O15084 1053 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 GRM6O15303 877 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SLC25A14O95258 325 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SMIM18P0DKX4 95 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 FCGR1AP12314 374 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 TCF3P15923 654 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 PRKG2Q13237 762 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 PPP4R4Q6NUP7 873 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 C22orf39Q6P5X5 142 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CRTC1Q6UUV9 634 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 LAYNQ6UX15 382 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 TRIM46Q7Z4K8 759 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CHERPQ8IWX8 916 aaKnown RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SFRP1Q8N474 314 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SNX31Q8N9S9 440 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 OR4F6Q8NGB9 312 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 LKAAEAR1Q8TD35 194 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 RHBDF1Q96CC6 855 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 TMEM79Q9BSE2 394 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 BOCQ9BWV1 1114 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SLC29A3Q9BZD2 475 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SUN2Q9UH99 717 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CRLS1Q9UJA2 301 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SLC28A1O00337 649 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 FGF18O76093 207 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CAPN1P07384 714 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 EBLN1P0CF75 366 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CA5AP35218 305 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 NFYCQ13952 458 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CHRNA6Q15825 494 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 AASDHQ4L235 1098 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 PROSER1Q86XN7 944 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 TCAIMQ8N3R3 496 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CDYL2Q8N8U2 506 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 MFSD2AQ8NA29 543 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 LRTOMTQ8WZ04 291 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 EME1Q96AY2 570 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 MRPS26Q9BYN8 205 aaKnown RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SARS2Q9NP81 518 aaKnown RBP12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SMOXQ9NWM0 555 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 ELOVL2Q9NXB9 296 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 UBAP1Q9NZ09 502 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 CLEC4EQ9ULY5 219 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SNX13Q9Y5W8 968 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 SLC4A7Q9Y6M7 1214 aa12.01□□□□□ -0.49
PTPRF-212ENST00000477970 TCRBV5S2A0A599 114 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 SERTM1A2A2V5 107 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 NPIPB8E9PQR5 432 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 SYNCRIPO60506 623 aaKnown RBP12□□□□□ -0.49
PTPRF-212ENST00000477970 ADH1AP07327 375 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 UFM1P61960 85 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 KIAA0907Q7Z7F0 614 aaPredicted RBP12□□□□□ -0.49
PTPRF-212ENST00000477970 METTL6Q8TCB7 284 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 CLP1Q92989 425 aaKnown RBP12□□□□□ -0.49
PTPRF-212ENST00000477970 TEX37Q96LM6 180 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 SLC39A3Q9BRY0 314 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 SUV39H2Q9H5I1 410 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 AGPAT4Q9NRZ5 378 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 NFKBIL1Q9UBC1 381 aaPredicted RBP12□□□□□ -0.49
PTPRF-212ENST00000477970 DHRS12A0PJE2 317 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 NPIPB15A6NHN6 443 aaPredicted RBP12□□□□□ -0.49
PTPRF-212ENST00000477970 GPR39O43194 453 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 SLC34A2O95436 690 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 MPC1LP0DKB6 136 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 GGTA1PQ4G0N0 100 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 FNDC5Q8NAU1 212 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 ZFAND2BQ8WV99 257 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 ACOX2Q99424 681 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 C17orf80Q9BSJ5 609 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 EMILIN2Q9BXX0 1053 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 ALG2Q9H553 416 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 IPPKQ9H8X2 491 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 CEP290O15078 2479 aa12□□□□□ -0.49
PTPRF-212ENST00000477970 A0A0U1RQS6 177 aa11.99□□□□□ -0.49
PTPRF-212ENST00000477970 K7EPI3 171 aa11.99□□□□□ -0.49
PTPRF-212ENST00000477970 ARPC2O15144 300 aa11.99□□□□□ -0.49
PTPRF-212ENST00000477970 SLC16A5O15375 505 aa11.99□□□□□ -0.49
PTPRF-212ENST00000477970 POP4O95707 220 aaKnown RBP11.99□□□□□ -0.49
PTPRF-212ENST00000477970 C8AP07357 584 aa11.99□□□□□ -0.49
PTPRF-212ENST00000477970 PSMA4P25789 261 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms