RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 CFAP20Q9Y6A4 193 aaKnown RBP13.53□□□□□ -0.24
SOX2-OT-208ENST00000477928 EFCAB7A8K855 629 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 NVLO15381 856 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 KIF1CO43896 1103 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 C1QL1O75973 258 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 ETS1P14921 441 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 NDUFS1P28331 727 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 LEPRP48357 1165 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 TMPRSS3P57727 454 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 BASP1P80723 227 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 PLOD1Q02809 727 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 RPA4Q13156 261 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 SEPT6Q14141 434 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 ZRANB3Q5FWF4 1079 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 FNBP1LQ5T0N5 605 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 TMEM164Q5U3C3 297 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 ANKS6Q68DC2 871 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 ZNF449Q6P9G9 518 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 FAM129CQ86XR2 697 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 PLXDC1Q8IUK5 500 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 SLC35F6Q8N357 371 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 BMPERQ8N8U9 685 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 SPDYE1Q8NFV5 336 aaPredicted RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 OR13J1Q8NGT2 312 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 HM13Q8TCT9 377 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 RSC1A1Q92681 617 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 MAGOHBQ96A72 148 aaKnown RBP13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 CXorf40BQ96DE9 158 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 SLC40A1Q9NP59 571 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 B3GALT1Q9Y5Z6 326 aa13.52□□□□□ -0.25
SOX2-OT-208ENST00000477928 AHCTF1Q8WYP5 2266 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 MN1Q10571 1320 aaPredicted RBP13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 MLNP12872 115 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 COILP38432 576 aaPredicted RBP13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 GRIA1P42261 906 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 CD151P48509 253 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 UCNP55089 124 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 VAC14Q08AM6 782 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 GPR18Q14330 331 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 CCDC38Q502W7 563 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 BROXQ5VW32 411 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 KLHL35Q6PF15 583 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 ARHGAP22Q7Z5H3 698 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 SERPINA9Q86WD7 417 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 MPP5Q8N3R9 675 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 AGBL5Q8NDL9 886 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 RUNDC3BQ96NL0 473 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 SEMA4CQ9C0C4 833 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 KCND1Q9NSA2 647 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 RNF14Q9UBS8 474 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 EPHA6Q9UF33 1036 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
SOX2-OT-208ENST00000477928 TEX51A0A1B0GUA7 166 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 MAGEB16A2A368 324 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 OR51F1A6NGY5 319 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 B4E171 279 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 K7ENP7 123 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 PHF2O75151 1096 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 UBXN7O94888 489 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 ZSCAN5DPP0CG00 497 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 FOXN2P32314 431 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 CSTF2P33240 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 TSPAN7P41732 249 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 KCNJ1P48048 391 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 RAB15P59190 212 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 CYP4F2P78329 520 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 PRAMEP78395 509 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 CYB5D1Q6P9G0 228 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 INO80CQ6PI98 192 aaPredicted RBP13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 CCDC137Q6PK04 289 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 TAS2R42Q7RTR8 314 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 DTX1Q86Y01 620 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 PIANPQ8IYJ0 282 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 MCUQ8NE86 351 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 OR4L1Q8NH43 312 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 SLCO2A1Q92959 643 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 TGM7Q96PF1 710 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 UBL7Q96S82 380 aaPredicted RBP13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 CCNL2Q96S94 520 aaPredicted RBP13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 ZPBPQ9BS86 351 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 KIFC1Q9BW19 673 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 TSSK1BQ9BXA7 367 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 TRMT1Q9NXH9 659 aaKnown RBP13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 SLC39A1Q9NY26 324 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 PCDHGA3Q9Y5H0 932 aa13.5□□□□□ -0.25
SOX2-OT-208ENST00000477928 LIN7AO14910 233 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 PFDN6O15212 129 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 ATXN7O15265 892 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 KRT14P02533 472 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 C9P02748 559 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 FTH1P02794 183 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 SLC35G4P0C7Q5 338 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 LIPCP11150 499 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 MTHFD1P11586 935 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 AMD1P17707 334 aa13.49□□□□□ -0.25
SOX2-OT-208ENST00000477928 CAPZBP47756 277 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms