RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 BRSK1Q8TDC3 778 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 TTC25Q96NG3 672 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 ZCCHC2Q9C0B9 1178 aaKnown RBP19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 RUBCNLQ9H714 662 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 KIR3DX1Q9H7L2 352 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 SLC24A2Q9UI40 661 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 OSGIN2Q9Y236 505 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 CFAP20Q9Y6A4 193 aaKnown RBP19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 CCDC168Q8NDH2 2452 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 SPTBP11277 2137 aa19.7■□□□□ 0.74
PDLIM1-202ENST00000477757 SLC9B1P1A6NJY1 282 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 LRRC53A6NM62 1247 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 PRSS44E7EML9 344 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 DDX3YO15523 660 aaKnown RBP19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 POP7O75817 140 aaKnown RBP19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 ARCN1P48444 511 aaKnown RBP19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 CTSCP53634 463 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 IFI35P80217 286 aaPredicted RBP19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 NFE2L1Q14494 772 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 ZNF385CQ66K41 422 aaPredicted RBP19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 APTXQ7Z2E3 356 aaKnown RBP19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 ZFPM2Q8WW38 1151 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 ZNF670Q9BS34 389 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 C1GALT1Q9NS00 363 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 MTORP42345 2549 aa19.69■□□□□ 0.74
PDLIM1-202ENST00000477757 PCM1Q15154 2024 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 LRRC10BA6NIK2 292 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 KCNK1O00180 336 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 HLA-DPA1P20036 260 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 SOX8P57073 446 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 ZBTB17Q13105 803 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 ASIC2Q16515 512 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 ZXDCQ2QGD7 858 aaPredicted RBP19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 E4F1Q66K89 784 aaPredicted RBP19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 RASGEF1AQ8N9B8 481 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 CCNYQ8ND76 341 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 IMP4Q96G21 291 aaKnown RBP19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 WDR77Q9BQA1 342 aaPredicted RBP19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 C17orf62Q9BQA9 187 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 ISCUQ9H1K1 167 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 ZBTB20Q9HC78 741 aaPredicted RBP19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 IP6K2Q9UHH9 426 aa19.68■□□□□ 0.74
PDLIM1-202ENST00000477757 MATN2O00339 956 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 PEX12O00623 359 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 EDN3P14138 238 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 AGXTP21549 392 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 CDH3P22223 829 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 PRKCIP41743 596 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 PREPP48147 710 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 SSPNQ14714 243 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 ANO6Q4KMQ2 910 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 METRNLQ641Q3 311 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 BTBD6Q96KE9 485 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 SRPK1Q96SB4 655 aaKnown RBP19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 INSM2Q96T92 566 aaPredicted RBP19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 NOVA2Q9UNW9 492 aaKnown RBP19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 SPO11Q9Y5K1 396 aa19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 DNMT3AQ9Y6K1 912 aaPredicted RBP19.67■□□□□ 0.74
PDLIM1-202ENST00000477757 AURKAO14965 403 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 HBQ1P09105 142 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 POLR2CP19387 275 aaPredicted RBP19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 PPIDQ08752 370 aaKnown RBP19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 SLC10A2Q12908 348 aaPredicted RBP19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 PCSK7Q16549 785 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 DDHD1Q8NEL9 900 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 DTX3LQ8TDB6 740 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 GRHL3Q8TE85 626 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 PPP4R1Q8TF05 950 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 TADA1Q96BN2 335 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 FAF2Q96CS3 445 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 C12orf66Q96MD2 445 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 PITPNM3Q9BZ71 974 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 SLC7A5P2Q9GIP4 190 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 WWP1Q9H0M0 922 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 BPIFA1Q9NP55 256 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 IL26Q9NPH9 171 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 P4HTMQ9NXG6 502 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 SERTAD3Q9UJW9 196 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 ANAPC7Q9UJX3 599 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 CSAG2Q9Y5P2 127 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 SEC16AO15027 2179 aa19.66■□□□□ 0.74
PDLIM1-202ENST00000477757 FER1L5A0AVI2 2057 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 OR2AG2A6NM03 316 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 E7EQ34 232 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 ZNF749O43361 778 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 LDB2O43679 373 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 STSP08842 583 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 PBLDP30039 288 aaPredicted RBP19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 HMGCLP35914 325 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 FOLR3P41439 243 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 TSFMP43897 325 aaKnown RBP19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 PRKAA1Q13131 559 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 SLC14A2Q15849 920 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 LDLRAP1Q5SW96 308 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 GDF7Q7Z4P5 450 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 PQLC3Q8N755 202 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 ZNF830Q96NB3 372 aaPredicted RBP19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 CBX8Q9HC52 389 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 AIPL1Q9NZN9 384 aa19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 COPG2Q9UBF2 871 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms