RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 GJA4P35212 333 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GCKP35557 465 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 CDH13P55290 713 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ACTR3P61158 418 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 MAD2L1Q13257 205 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 ADAM15Q13444 863 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ART3Q13508 389 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ENPP2Q13822 863 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GTF2H2Q13888 395 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ZNF234Q14588 700 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PTPRRQ15256 657 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 RBBP7Q16576 425 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 BCL7AQ4VC05 210 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ACSBG2Q5FVE4 666 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 C10orf62Q5T681 223 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 TRIM68Q6AZZ1 485 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 TANGO2Q6ICL3 276 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GTF2H2CQ6P1K8 395 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PRMT9Q6P2P2 845 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PGM2L1Q6PCE3 622 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 VITQ6UXI7 678 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 Q6ZVL8 140 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ERN2Q76MJ5 926 aaKnown RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 LRRC70Q7Z2Q7 622 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 HSD11B1LQ7Z5J1 315 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PGAM4Q8N0Y7 254 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 MIER2Q8N344 545 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PHTF2Q8N3S3 785 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 CLDN19Q8N6F1 224 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PNPLA1Q8N8W4 532 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PCYOX1LQ8NBM8 494 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PIP4K2CQ8TBX8 421 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GDPD5Q8WTR4 605 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ASB11Q8WXH4 323 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 GLMNQ92990 594 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ROPN1LQ96C74 230 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 AP2M1Q96CW1 435 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 PRR11Q96HE9 360 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 COQ10AQ96MF6 247 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 FOPNLQ96NB1 174 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 THTPAQ9BU02 230 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 NTMT1Q9BV86 223 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 TRMT61BQ9BVS5 477 aaKnown RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 BOCQ9BWV1 1114 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 SLC29A3Q9BZD2 475 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 CD244Q9BZW8 370 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 SLC32A1Q9H598 525 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 DENND2DQ9H6A0 471 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 TRPV5Q9NQA5 729 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 WWOXQ9NZC7 414 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 NOP53Q9NZM5 478 aaKnown RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 GALPQ9UBC7 116 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 STOML1Q9UBI4 398 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 OPTCQ9UBM4 332 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 TRPS1Q9UHF7 1281 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 NDUFAF1Q9Y375 327 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 ANGPTL3Q9Y5C1 460 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 DNMT3AQ9Y6K1 912 aaPredicted RBP7.8□□□□□ -1.16
VMA21-203ENST00000477649 PRSS21Q9Y6M0 314 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 LAMA3Q16787 3333 aa7.8□□□□□ -1.16
VMA21-203ENST00000477649 IQCF5A8MTL0 148 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 GFYI3L273 518 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SLC28A1O00337 649 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 LIN7AO14910 233 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 PIP5K1BO14986 540 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 TRIM24O15164 1050 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 UGDHO60701 494 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SKAP2O75563 359 aaPredicted RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 STK16O75716 305 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 KAT7O95251 611 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 ADH1BP00325 375 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 NPPAP01160 153 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CATP04040 527 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 PRR35P0CG20 571 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 LAMP2P13473 410 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 ADRB3P13945 408 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 EPB42P16452 691 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 MAP4P27816 1152 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 CCR7P32248 378 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 OPRD1P41143 372 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CCR10P46092 362 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 SLC6A11P48066 632 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 PSMD8P48556 350 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 RPIAP49247 311 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 PRLHRP49683 370 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CCNG1P51959 295 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 HK3P52790 923 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 MTTPP55157 894 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 ERVK-8P63133 956 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 B4GALNT1Q00973 533 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 FOXM1Q08050 763 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 HYAL1Q12794 435 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 CUL3Q13618 768 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 GTF2H3Q13889 308 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 PTK2BQ14289 1009 aa7.79□□□□□ -1.16
VMA21-203ENST00000477649 FASTKQ14296 549 aaKnown RBP7.79□□□□□ -1.16
VMA21-203ENST00000477649 ACOX1Q15067 660 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms