RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 FGF3P11487 239 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 AMD1P17707 334 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CSTF2P33240 577 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 FDFT1P37268 417 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 HALP42357 657 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 GFERP55789 205 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CDH17Q12864 832 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CALCOCO2Q13137 446 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CLN3Q13286 438 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 SQSTM1Q13501 440 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 SEMA5AQ13591 1074 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 GPR18Q14330 331 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 TRIP13Q15645 432 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 RPE65Q16518 533 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CLPPQ16740 277 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 AGAP9Q5VTM2 703 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 BROXQ5VW32 411 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 DUPD1Q68J44 220 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 TMEM26Q6ZUK4 368 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CLEC14AQ86T13 490 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 SERPINA9Q86WD7 417 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 FAM129CQ86XR2 697 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 PIANPQ8IYJ0 282 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 CFAP206Q8IYR0 622 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 NXPE1Q8N323 547 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 AGBL5Q8NDL9 886 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 GPR150Q8NGU9 434 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 STYXQ8WUJ0 223 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 IFT81Q8WYA0 676 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 TMEM159Q96B96 161 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 ULK4Q96C45 1275 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 RNF31Q96EP0 1072 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF514Q96K75 400 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 FCRL3Q96P31 734 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 TGM7Q96PF1 710 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 INSM2Q96T92 566 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 COPS8Q99627 209 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 TRIM51Q9BSJ1 452 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 WWP1Q9H0M0 922 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 SLC40A1Q9NP59 571 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 RYDENQ9NUL5 291 aaKnown RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 IMP3Q9NV31 184 aaKnown RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 ZDHHC3Q9NYG2 299 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 OGFRQ9NZT2 677 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 PAK5Q9P286 719 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 SLC2A6Q9UGQ3 507 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 ASIC3Q9UHC3 531 aa8.11□□□□□ -1.11
HDAC6-221ENST00000477561 DNMT3AQ9Y6K1 912 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 ZFC3H1O60293 1989 aaKnown RBP8.11□□□□□ -1.11
HDAC6-221ENST00000477561 ESYT3A0FGR9 886 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC162PA2VCL2 907 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 MGAT4DA6NG13 374 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 MROH6A6NGR9 719 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 LILRA5A6NI73 299 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ERI2A8K979 691 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 BHMG1C9JSJ3 638 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CFAP99D6REC4 459 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 HGSO14964 777 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 NVLO15381 856 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ATP8B1O43520 1251 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 KCNJ13O60928 360 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SUN1O94901 812 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 KRT14P02533 472 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ATP1B2P14415 290 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ACRV1P26436 265 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 LEPRP48357 1165 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 VPS41P49754 854 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SEPHS1P49903 392 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 EPHA4P54764 986 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SESN2P58004 480 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 BASP1P80723 227 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CAV1Q03135 178 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CACNG1Q06432 222 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 DMPKQ09013 629 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SRSF6Q13247 344 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 TRA2AQ13595 282 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SKIDA1Q1XH10 827 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 GPR33Q49SQ1 333 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 BCL7AQ4VC05 210 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ARHGAP40Q5TG30 622 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 METRNLQ641Q3 311 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 DUS1LQ6P1R4 473 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 WDR74Q6RFH5 385 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 XKR5Q6UX68 686 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 C4orf22Q6V702 233 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 WASH2PQ6VEQ5 465 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 PCGF5Q86SE9 256 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CLDN19Q8N6F1 224 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 AVL9Q8NBF6 648 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 OR2L2Q8NH16 312 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 RSC1A1Q92681 617 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ART4Q93070 314 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 HDAC10Q969S8 669 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SNF8Q96H20 258 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF778Q96MU6 729 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CTRCQ99895 268 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 DPYSL5Q9BPU6 564 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms