RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 POC1BQ8TC44 478 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ATP8B4Q8TF62 1192 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CLEC4CQ8WTT0 213 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CACTINQ8WUQ7 758 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HEXDCQ8WVB3 486 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RLN3Q8WXF3 142 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ST8SIA2Q92186 375 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 INPP5DQ92835 1189 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PEX13Q92968 403 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CAVIN3Q969G5 261 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SPSB1Q96BD6 273 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SLC7A6OSQ96CW6 309 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 BSCL2Q96G97 398 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC120Q96HB5 630 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 C8orf76Q96K31 380 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RPGRIP1Q96KN7 1286 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HARBI1Q96MB7 349 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SPATA13Q96N96 652 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 USP28Q96RU2 1077 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 UBL7Q96S82 380 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PCYT2Q99447 389 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 VKORC1Q9BQB6 163 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FAM83CQ9BQN1 747 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RIOK1Q9BRS2 568 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FAM213AQ9BRX8 229 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FICDQ9BVA6 458 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF416Q9BWM5 594 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CAPS2Q9BXY5 557 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM117Q9H0C3 514 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 S1PR5Q9H228 398 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 P2RY12Q9H244 342 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 KCNK15Q9H427 330 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HAUS4Q9H6D7 363 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CXorf36Q9H7Y0 433 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 COG4Q9H9E3 785 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PARVGQ9HBI0 331 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PAG1Q9NWQ8 432 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 BARHL2Q9NY43 387 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ETAA1Q9NY74 926 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SLCO1C1Q9NYB5 712 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 DLL3Q9NYJ7 618 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 IL20Q9NYY1 176 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 OR6C3Q9NZP0 311 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZFP69BQ9UJL9 534 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 AGO2Q9UKV8 859 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RIMKLBQ9ULI2 386 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PLAGL2Q9UPG8 496 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 R3HDM2Q9Y2K5 976 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MRPS17Q9Y2R5 130 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MAU2Q9Y6X3 613 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PIK3C2BO00750 1634 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 METP08581 1390 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 KANK1Q14678 1352 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZFYVE9O95405 1425 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TRPM2O94759 1503 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 FITM1A5D6W6 292 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 CDHR4A6H8M9 788 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 GOLGA8OA6NCC3 632 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM247A6NEH6 219 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PRR23AA6NEV1 266 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 MFSD2BA6NFX1 497 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 NPIPB13A6NJU9 1138 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TBKBP1A7MCY6 615 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 NPIPB5A8MRT5 1133 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 CAPN14A8MX76 684 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 NPIPB4C9JG80 1138 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 E7ENX8 843 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 GOLGA8NF8WBI6 632 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 GOLGA8SH3BPF8 625 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 AGPSO00116 658 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PSMD9O00233 223 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 WNT10BO00744 389 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 HS3ST1O14792 307 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 YKT6O15498 198 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 DHX15O43143 795 aaKnown RBP2.85□□□□□ -1.95
HMGN4-202ENST00000477243 ST8SIA3O43173 380 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 SEC14L5O43304 696 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 OIP5O43482 229 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 MED7O43513 233 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 CIDEAO60543 219 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PDE9AO76083 593 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TOX4O94842 621 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 ALX3O95076 343 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 NKX2-2O95096 273 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PGLSO95336 258 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 OTCP00480 354 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 HLA-DQA2P01906 255 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TFP02787 698 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 LIPFP07098 398 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 IVLP07476 585 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 ZGLP1P0C6A0 271 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 EBLN1P0CF75 366 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 STAG3L3P0CL85 134 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 SLC2A4P14672 509 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 TCF4P15884 667 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 IGFBP2P18065 325 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 MATN1P21941 496 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PRPH2P23942 346 aa2.85□□□□□ -1.95
HMGN4-202ENST00000477243 PTBP1P26599 531 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGN4-202ENST00000477243 CCND3P30281 292 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms