RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 CPT1BQ92523 772 aa12□□□□□ -0.49
PRKD3-209ENST00000477132 TMEM159Q96B96 161 aa12□□□□□ -0.49
PRKD3-209ENST00000477132 TRIM56Q9BRZ2 755 aaKnown RBP12□□□□□ -0.49
PRKD3-209ENST00000477132 IMP3Q9NV31 184 aaKnown RBP12□□□□□ -0.49
PRKD3-209ENST00000477132 OCIAD1Q9NX40 245 aa12□□□□□ -0.49
PRKD3-209ENST00000477132 MARCH4Q9P2E8 410 aaPredicted RBP12□□□□□ -0.49
PRKD3-209ENST00000477132 KLHL3Q9UH77 587 aa12□□□□□ -0.49
PRKD3-209ENST00000477132 C17orf113A0A1B0GUU1 675 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 UBXN7O94888 489 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 C9P02748 559 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 ARNTP27540 789 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 PDHA2P29803 388 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 ABCG1P45844 678 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 CAPZBP47756 277 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 PREPP48147 710 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 GNG11P61952 73 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 TLE3Q04726 772 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 TRA2AQ13595 282 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 LAMB3Q13751 1172 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 ITIH4Q14624 930 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 CAPRIN2Q6IMN6 1127 aaKnown RBP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 CES3Q6UWW8 571 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 PACS1Q6VY07 963 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 NAPRTQ6XQN6 538 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 ARHGAP22Q7Z5H3 698 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 CAND1Q86VP6 1230 aaKnown RBP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 JAMLQ86YT9 394 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 AGGF1Q8N302 714 aaeCLIP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 C17orf53Q8N3J3 647 aaPredicted RBP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 BMPERQ8N8U9 685 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 OR6P1Q8NGX9 317 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 OR4L1Q8NH43 312 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 KCNE4Q8WWG9 221 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 PEX13Q92968 403 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 USP7Q93009 1102 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 MFSD3Q96ES6 412 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 C12orf66Q96MD2 445 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 NAP1L3Q99457 506 aaPredicted RBP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 NRTNQ99748 197 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 DPYSL5Q9BPU6 564 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 CCM2Q9BSQ5 444 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 IL22Q9GZX6 179 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 DDX47Q9H0S4 455 aaKnown RBP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 OR52A5Q9H2C5 316 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 PCDHGA7Q9Y5G6 932 aa11.99□□□□□ -0.49
PRKD3-209ENST00000477132 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
PRKD3-209ENST00000477132 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 RRP8O43159 456 aaKnown RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 KIF1CO43896 1103 aaKnown RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 SLC35G4P0C7Q5 338 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 TCP1P17987 556 aaKnown RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 NSG1P42857 185 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 NPY2RP49146 381 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 FNTAP49354 379 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 PRAMEP78395 509 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 CDK16Q00536 496 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 SRSF6Q13247 344 aaKnown RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 CLN3Q13286 438 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 TGIF1Q15583 401 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 PAPD7Q5XG87 772 aaKnown RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 NLRP9Q7RTR0 991 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 RBM12BQ8IXT5 1001 aaKnown RBP11.98□□□□□ -0.49
PRKD3-209ENST00000477132 AGBL5Q8NDL9 886 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 SGSM3Q96HU1 749 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 CAPZA3Q96KX2 299 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 C9orf72Q96LT7 481 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 TGM7Q96PF1 710 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 KIFC1Q9BW19 673 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 EPB41L1Q9H4G0 881 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 BFARQ9NZS9 450 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 ACSL6Q9UKU0 697 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 ACSL5Q9ULC5 683 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 SOX13Q9UN79 622 aa11.98□□□□□ -0.49
PRKD3-209ENST00000477132 GOLGA6L10A0A0M3HER8 536 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 KLHL33A6NCF5 533 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 EFCAB7A8K855 629 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 IQCF5A8MTL0 148 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 GOLGA8MH3BSY2 632 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 NVLO15381 856 aaKnown RBP11.97□□□□□ -0.49
PRKD3-209ENST00000477132 KLK10O43240 276 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 AP2A2O94973 939 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 AMD1P17707 334 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 ITGB6P18564 788 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 CSTF2P33240 577 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRKD3-209ENST00000477132 PTGIRP43119 386 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 FASTKD1Q53R41 847 aaKnown RBP11.97□□□□□ -0.49
PRKD3-209ENST00000477132 ANKS6Q68DC2 871 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 LRRC69Q6ZNQ3 347 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 ZFAND4Q86XD8 727 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 FAM129CQ86XR2 697 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 NAT8LQ8N9F0 302 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 ART4Q93070 314 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 SERPINB12Q96P63 405 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 MRM3Q9HC36 420 aaKnown RBP11.97□□□□□ -0.49
PRKD3-209ENST00000477132 APMAPQ9HDC9 416 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 CATSPERZQ9NTU4 200 aa11.97□□□□□ -0.49
PRKD3-209ENST00000477132 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms