RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CCDC181Q5TID7 509 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 ASB18Q6ZVZ8 466 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 CFAP206Q8IYR0 622 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 TAB3Q8N5C8 712 aaPredicted RBP11.38□□□□□ -0.59
VARS2-208ENST00000477052 SLC38A9Q8NBW4 561 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 OR4E2Q8NGC2 313 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 CCDC110Q8TBZ0 833 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 ACTL9Q8TC94 416 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 TLR10Q9BXR5 811 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 KLHL25Q9H0H3 589 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 SLC24A2Q9UI40 661 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 ANAPC2Q9UJX6 822 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 POLHQ9Y253 713 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 MAN2B2Q9Y2E5 1009 aa11.38□□□□□ -0.59
VARS2-208ENST00000477052 GOLGA6L3A6NEY3 463 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 MGAT4DA6NG13 374 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 SLC9B1P1A6NJY1 282 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 HACD1B0YJ81 288 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 KCNN4O15554 427 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 LPOP22079 712 aaPredicted RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 ADRA1AP35348 466 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 GEMP55040 296 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 HADHBP55084 474 aaKnown RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 EIF3EP60228 445 aaKnown RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 GPS2Q13227 327 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 LONRF2Q1L5Z9 754 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 ANKRD20A2Q5SQ80 823 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 ANKRD20A1Q5TYW2 823 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 ANKRD20A3Q5VUR7 823 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 ZDHHC20Q5W0Z9 365 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 RANBP10Q6VN20 620 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 PHC3Q8NDX5 983 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 OR2L2Q8NH16 312 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 UBXN4Q92575 508 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 RBM41Q96IZ5 413 aaKnown RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 ZNF514Q96K75 400 aaPredicted RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 VAT1Q99536 393 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 RAB33BQ9H082 229 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 PIH1D1Q9NWS0 290 aaKnown RBP11.37□□□□□ -0.59
VARS2-208ENST00000477052 SOHLH2Q9NX45 425 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 SEMA5BQ9P283 1151 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 CRLS1Q9UJA2 301 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 KCND3Q9UK17 655 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 TRHDEQ9UKU6 1024 aa11.37□□□□□ -0.59
VARS2-208ENST00000477052 SPTBP11277 2137 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 CCDC78A2IDD5 438 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 CCDC66A2RUB6 948 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 TLCD2A6NGC4 264 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 SOWAHDA6NJG2 315 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 ARGFXA6NJG6 315 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 C2orf81A6NN90 581 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 MKRN2OSH3BPM6 223 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 APOC4-APOC2K7ER74 178 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 KCNJ13O60928 360 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 RFPL1O75677 317 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 SCRG1O75711 98 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 APOC2P02655 101 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 SLC35G4P0C7Q5 338 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 PVRP15151 417 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 TPH1P17752 444 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 HSD11B2P80365 405 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 KLRB1Q12918 225 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 ABRQ12979 859 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 MSLNQ13421 630 aaPredicted RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 UBAP2LQ14157 1087 aaKnown RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 KRT33BQ14525 404 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 TAF1AQ15573 450 aaPredicted RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 CRTC2Q53ET0 693 aaPredicted RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 DENND5AQ6IQ26 1287 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 C11orf63Q6NUN7 778 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 ARMC6Q6NXE6 501 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 DARS2Q6PI48 645 aaKnown RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 OOSP2Q86WS3 158 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 D2HGDHQ8N465 521 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 DTX3LQ8TDB6 740 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 MR1Q95460 341 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 ZNF501Q96CX3 271 aaPredicted RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 TRIM5Q9C035 493 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 CHST8Q9H2A9 424 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 XKR8Q9H6D3 395 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 KIR3DX1Q9H7L2 352 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 SMOXQ9NWM0 555 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.36□□□□□ -0.59
VARS2-208ENST00000477052 ANKMY1Q9P2S6 941 aa11.36□□□□□ -0.59
VARS2-208ENST00000477052 DNMT3AQ9Y6K1 912 aaPredicted RBP11.36□□□□□ -0.59
VARS2-208ENST00000477052 UTP20O75691 2785 aaKnown RBP11.35□□□□□ -0.59
VARS2-208ENST00000477052 GSAPA4D1B5 854 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 BTN3A3O00478 584 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PJA2O43164 708 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 ANXA9O76027 345 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 RBP3P10745 1247 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PYGMP11217 842 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PTPN4P29074 926 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PDHA2P29803 388 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PREPP48147 710 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 CCL11P51671 97 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms