RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SLC5A10A0PJK1 596 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 KLK8O60259 260 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 NPHS1O60500 1241 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 SLCO2B1O94956 709 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 TGDSO95455 350 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 MYCLP1P12525 358 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 HERVK_113P63132 956 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 ZNF678Q5SXM1 525 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 GJD3Q8N144 294 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 CCDC197Q8NCU1 140 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 SKA2Q8WVK7 121 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 DLG3Q92796 817 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 TMEM159Q96B96 161 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 TOE1Q96GM8 510 aaKnown RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 LINC00615Q96LM1 132 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 ERVK-6Q9BXR3 956 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 TRIM55Q9BYV6 548 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 TPSD1Q9BZJ3 242 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 NUDT4Q9NZJ9 180 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 CD274Q9NZQ7 290 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 MARCOQ9UEW3 520 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 DNAJC16Q9Y2G8 782 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 PRKAB1Q9Y478 270 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 OARD1Q9Y530 152 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 C10orf142B7Z368 130 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 CHUKO15111 745 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 SIX3O95343 332 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 KITP10721 976 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 PREPP48147 710 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 PHKG1Q16816 387 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 PLA2G4EQ3MJ16 856 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 RPS27LQ71UM5 84 aaKnown RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 RAB44Q7Z6P3 723 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 DENND6BQ8NEG7 585 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 RFWD2Q8NHY2 731 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 GLMNQ92990 594 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 ASB2Q96Q27 587 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 APOOQ9BUR5 198 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 C6orf106Q9H6K1 298 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-211ENST00000476772 KLHL14Q9P2G3 628 aa28.29■■■□□ 2.12
VEGFA-211ENST00000476772 ANKRD12Q6UB98 2062 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 LRRC14BA6NHZ5 514 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 POP7O75817 140 aaKnown RBP28.28■■■□□ 2.12
VEGFA-211ENST00000476772 UNC50Q53HI1 259 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 ARL13AQ5H913 290 aaPredicted RBP28.28■■■□□ 2.12
VEGFA-211ENST00000476772 NEK10Q6ZWH5 1172 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 C11orf96Q7Z7L8 435 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 LSMEM2Q8N112 164 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 SPEM1Q8N4L4 309 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 TMCO1Q9UM00 188 aa28.28■■■□□ 2.12
VEGFA-211ENST00000476772 SNX2O60749 519 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 CLDN2P57739 230 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 FBXO48Q5FWF7 155 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 FOXR1Q6PIV2 292 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 CNDP1Q96KN2 507 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 GSTO2Q9H4Y5 243 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 DCTN4Q9UJW0 460 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 CA5BQ9Y2D0 317 aa28.27■■■□□ 2.12
VEGFA-211ENST00000476772 FFAR2O15552 330 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 LATO43561 262 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 HNRNPA2B1P22626 353 aaKnown RBP28.26■■■□□ 2.12
VEGFA-211ENST00000476772 OXTRP30559 389 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 ALDH18A1P54886 795 aaKnown RBP28.26■■■□□ 2.12
VEGFA-211ENST00000476772 XKR5Q6UX68 686 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 LRRTM4Q86VH4 590 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 CFAP206Q8IYR0 622 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 ZNF781Q8N8C0 355 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 COG4Q9H9E3 785 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 PNPOQ9NVS9 261 aa28.26■■■□□ 2.12
VEGFA-211ENST00000476772 WSB2Q9NYS7 404 aaPredicted RBP28.26■■■□□ 2.12
VEGFA-211ENST00000476772 POM121BA6NF01 834 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 STX16-NPEPL1H3BU86 382 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 STX16O14662 325 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 LIN7AO14910 233 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-211ENST00000476772 SUPT7LO94864 414 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 APBB3O95704 486 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 GSTM1P09488 218 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 EEF1DP29692 281 aaKnown RBP28.26■■■□□ 2.11
VEGFA-211ENST00000476772 CD6P30203 668 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 SERPINB5P36952 375 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 GSTM4Q03013 218 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 MTAPQ13126 283 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 FRMD7Q6ZUT3 714 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 UBE2R2Q712K3 238 aaPredicted RBP28.26■■■□□ 2.11
VEGFA-211ENST00000476772 FRMD1Q8N878 549 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 OR2L2Q8NH16 312 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 PIWIL2Q8TC59 973 aaKnown RBP28.26■■■□□ 2.11
VEGFA-211ENST00000476772 C10orf82Q8WW14 230 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 RLN3Q8WXF3 142 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 ASB11Q8WXH4 323 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 SHCBP1LQ9BZQ2 653 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 EBF2Q9HAK2 575 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 SIT1Q9Y3P8 196 aa28.26■■■□□ 2.11
VEGFA-211ENST00000476772 C17orf113A0A1B0GUU1 675 aa28.25■■■□□ 2.11
VEGFA-211ENST00000476772 ZNF217O75362 1048 aa28.25■■■□□ 2.11
VEGFA-211ENST00000476772 GUCA1CO95843 209 aa28.25■■■□□ 2.11
VEGFA-211ENST00000476772 C8GP07360 202 aa28.25■■■□□ 2.11
VEGFA-211ENST00000476772 DCNP07585 359 aaKnown RBP28.25■■■□□ 2.11
VEGFA-211ENST00000476772 MPSTP25325 297 aa28.25■■■□□ 2.11
VEGFA-211ENST00000476772 PDHA2P29803 388 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms