RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SAMHD1Q9Y3Z3 626 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 PCDHGB1Q9Y5G3 927 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 FKBP7Q9Y680 259 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 DISP2A7MBM2 1401 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MYH3P11055 1940 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 A0A0A6YYK5 440 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 CIB4A0PJX0 185 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 TRIM49BA6NDI0 452 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MROH6A6NGR9 719 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 A8MV72 311 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 B4E171 279 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 HSBP1L1C9JCN9 74 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 H7C2Y5 167 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 BTN3A3O00478 584 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 FSCN2O14926 492 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 STX7O15400 261 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 TBX1O43435 398 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 PSTPIP1O43586 416 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 SIGLEC6O43699 453 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 VEGFDO43915 354 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 PEX10O60683 326 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CELF2O95319 508 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 ZBTB7AO95365 584 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 SEC24AO95486 1093 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 RAB3DO95716 219 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 GGPS1O95749 300 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MBP02144 154 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 LTFP02788 710 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 KLK3P07288 261 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 ZNF806P0C7X5 589 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 TRIM49P0CI25 452 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 TRIM49CP0CI26 452 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 RRASP10301 218 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CKMT1AP12532 417 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 HNRNPLP14866 589 aaKnown RBP eCLIP4.1□□□□□ -1.753e-7■■□□□ 13.3
CD55-208ENST00000476590 MSH3P20585 1137 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 OGNP20774 298 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 G0S2P27469 103 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 IL1R2P27930 398 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NUP62P37198 522 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 CD79BP40259 229 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 RPS5P46782 204 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 QARSP47897 775 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 ALDH9A1P49189 494 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CCT3P49368 545 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 GZMKP49863 264 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 GNG10P50151 68 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 HLCSP50747 726 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MAPK10P53779 464 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 PMS1P54277 932 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 CDH4P55283 916 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 PSPHP78330 225 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ARHGAP8P85298 464 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 GRK1Q15835 563 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NRF1Q16656 503 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CA9Q16790 459 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 KNOP1Q1ED39 458 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 EPC2Q52LR7 807 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NOMO2Q5JPE7 1267 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MIIPQ5JXC2 388 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CLLU1Q5K131 121 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 PDZK1Q5T2W1 519 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 KRT39Q6A163 491 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 SCYL2Q6P3W7 929 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CRTC3Q6UUV7 619 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ETV3LQ6ZN32 361 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ZNF574Q6ZN55 896 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 EFL1Q7Z2Z2 1120 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 GALNTL5Q7Z4T8 443 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 DPPA2Q7Z7J5 298 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 GALNT10Q86SR1 603 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 LHFPL3Q86UP9 236 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 RAB43Q86YS6 212 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 FAM178BQ8IXR5 827 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 FAM217AQ8IXS0 508 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 RBFAQ8N0V3 343 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 LILRA2Q8N149 483 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 KRT78Q8N1N4 520 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 METTL4Q8N3J2 472 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ZNF276Q8N554 614 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NIPA2Q8N8Q9 360 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 KYQ8NBH2 561 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 OR6B3Q8NGW1 331 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 AKR7LQ8NHP1 331 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 HUS1BQ8NHY5 278 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 RP9Q8TA86 221 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 SLC30A5Q8TAD4 765 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 DTD1Q8TEA8 209 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 SLC7A6Q92536 515 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ELMO1Q92556 727 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 TFAP2CQ92754 450 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 USP13Q92995 863 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 KISS1RQ969F8 398 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 C19orf60Q96EN9 201 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 CNOT6LQ96LI5 555 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 C10orf90Q96M02 699 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NT5C1BQ96P26 610 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 OR5M11Q96RB7 305 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 OR52B2Q96RD2 323 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MED18Q9BUE0 208 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms