RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 AP1ARQ63HQ0 302 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 DPY19L3Q6ZPD9 716 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 CATSPER1Q8NEC5 780 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ASIC4Q96FT7 647 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 EGFL8Q99944 293 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 LINC00597Q9H2U6 94 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ABCD2Q9UBJ2 740 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 RNF11Q9Y3C5 154 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ST14Q9Y5Y6 855 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ZBBXA8MT70 800 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 PDLIM1O00151 329 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 VILLO15195 856 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 CSNK1DP48730 415 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 KCNK10P57789 538 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ERVK-8P63133 956 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 RBBP5Q15291 538 aaKnown RBP16.37■□□□□ 0.21
TVP23B-202ENST00000476139 TIGD2Q4W5G0 525 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ATP6AP1LQ52LC2 224 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 RFTN2Q52LD8 501 aaPredicted RBP16.37■□□□□ 0.21
TVP23B-202ENST00000476139 SCRN2Q96FV2 425 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 TMEM74Q96NL1 305 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 ZDHHC6Q9H6R6 413 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 CAAP1Q9H8G2 361 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 FARSBQ9NSD9 589 aaKnown RBP16.37■□□□□ 0.21
TVP23B-202ENST00000476139 PTBP2Q9UKA9 531 aaKnown RBP16.37■□□□□ 0.21
TVP23B-202ENST00000476139 CNOT6Q9ULM6 557 aaKnown RBP16.37■□□□□ 0.21
TVP23B-202ENST00000476139 FFAR3O14843 346 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 GPR42O15529 346 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 CAPNS1P04632 268 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 PSMC3P17980 439 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 RPS3P23396 243 aaKnown RBP eCLIP16.36■□□□□ 0.21
TVP23B-202ENST00000476139 RFC2P35250 354 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 PPM1AP35813 382 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 SPAM1P38567 509 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 NFYCQ13952 458 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 ATP13A5Q4VNC0 1218 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 TMEM126BQ8IUX1 230 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 NXPE1Q8N323 547 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 ZBTB2Q8N680 514 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 ZFP28Q8NHY6 868 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 TMEM79Q9BSE2 394 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 OCEL1Q9H607 264 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 LATS2Q9NRM7 1088 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 CD84Q9UIB8 345 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 CCDC154A6NI56 674 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 RAD51BO15315 384 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 TNFAIP8O95379 198 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 UGT2B4P06133 528 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 G6PDP11413 515 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 SLC7A1P30825 629 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 POLR2JP52435 117 aaKnown RBP16.36■□□□□ 0.21
TVP23B-202ENST00000476139 SNRPD1P62314 119 aaKnown RBP16.36■□□□□ 0.21
TVP23B-202ENST00000476139 CHST14Q8NCH0 376 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 BRINP2Q9C0B6 783 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 SUV39H2Q9H5I1 410 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 ASAH2Q9NR71 780 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 USP22Q9UPT9 525 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 ZNF510Q9Y2H8 683 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 PCDHA9Q9Y5H5 950 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 HCFC2Q9Y5Z7 792 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 V9GYQ6 96 aa16.36■□□□□ 0.21
TVP23B-202ENST00000476139 DGKAP23743 735 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 MAPK8P45983 427 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 RGS4P49798 205 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 B4GALNT1Q00973 533 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 PLIN5Q00G26 463 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 TRAF3Q13114 568 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 MILR1Q7Z6M3 343 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 KIAA2013Q8IYS2 634 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 TCF25Q9BQ70 676 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 FAM126AQ9BYI3 521 aaPredicted RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 INTS7Q9NVH2 962 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 GID8Q9NWU2 228 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 TNPO3Q9Y5L0 923 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 H3BSA7 217 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 SOCS2O14508 198 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 AP1G1O43747 822 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 MT-ND1P03886 318 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 MTHFD1P11586 935 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 GRAMD4Q6IC98 578 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 C22orf39Q6P5X5 142 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 ZBTB49Q6ZSB9 765 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 Q6ZVU0 165 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 DET1Q7L5Y6 550 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 PDPRQ8NCN5 879 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 OR2T34Q8NGX1 318 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 OR2T3Q8NH03 318 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 TMIGD2Q96BF3 282 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 MAFFQ9ULX9 164 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 OARD1Q9Y530 152 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 CHD9Q3L8U1 2897 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 LSM1O15116 133 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 RSL1D1O76021 490 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 S100BP04271 92 aaPredicted RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 NCK1P16333 377 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 CDH15P55291 814 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 SLC2A7Q6PXP3 512 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 TPRG1Q6ZUI0 275 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms