RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 HALP42357 657 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ATP5OP48047 213 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ARCN1P48444 511 aaKnown RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 KPNA2P52292 529 aaKnown RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF140P52738 457 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 COPS2P61201 443 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 FOXK1P85037 733 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 TMPRSS15P98073 1019 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 TUBB3Q13509 450 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ITGA9Q13797 1035 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 GTF2H3Q13889 308 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 BCL7AQ4VC05 210 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 FAM69BQ5VUD6 431 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 KCTD11Q693B1 232 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 RAD9BQ6WBX8 426 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF517Q6ZMY9 492 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 PPP1R3BQ86XI6 285 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 CFAP206Q8IYR0 622 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 CCDC170Q8IYT3 715 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 D2HGDHQ8N465 521 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 C9orf43Q8TAL5 461 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 CT55Q8WUE5 264 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 UBXN4Q92575 508 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 RBM41Q96IZ5 413 aaKnown RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 LINC00615Q96LM1 132 aaPredicted RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 RMDN2Q96LZ7 410 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 SPATA13Q96N96 652 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 EFHD1Q9BUP0 239 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 FSD1LQ9BXM9 530 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 OSBPL8Q9BZF1 889 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 TRIM5Q9C035 493 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ASB8Q9H765 288 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 ARNT2Q9HBZ2 717 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 IMP3Q9NV31 184 aaKnown RBP6.85□□□□□ -1.31
HDAC3-207ENST00000475549 FAM8A1Q9UBU6 413 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 LNPEPQ9UIQ6 1025 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 PADI1Q9ULC6 663 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 PCDHGA6Q9Y5G7 932 aa6.85□□□□□ -1.31
HDAC3-207ENST00000475549 TCRBV7S2A1N4TA0A589 114 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PIPSLA2A3N6 862 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 GRID2IPA4D2P6 1211 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 C2orf81A6NN90 581 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 BTN3A3O00478 584 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 KCNN4O15554 427 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PJA2O43164 708 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 CREG1O75629 220 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ANXA9O76027 345 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 RECKO95980 971 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 CCNYL3P0C7X3 344 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 TPBGLP0DKB5 382 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 RBP3P10745 1247 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 TPH1P17752 444 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 CTNNA2P26232 953 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 GEMP55040 296 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 GDF10P55107 478 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 EIF3EP60228 445 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 RPS18P62269 152 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 HSD11B2P80365 405 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 GPS2Q13227 327 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 SPA17Q15506 151 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 GPR19Q15760 415 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 LONRF2Q1L5Z9 754 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF789Q5FWF6 425 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 DNTTIP2Q5QJE6 756 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PLEKHS1Q5SXH7 462 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 DARS2Q6PI48 645 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PIANPQ8IYJ0 282 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 NXPE1Q8N323 547 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 CLDN19Q8N6F1 224 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 FAM71DQ8N9W8 422 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 SIDT2Q8NBJ9 832 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PHC3Q8NDX5 983 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ACRBPQ8NEB7 543 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 OR4E2Q8NGC2 313 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ZFPM2Q8WW38 1151 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 COL26A1Q96A83 441 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF501Q96CX3 271 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 STAMBPL1Q96FJ0 436 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF514Q96K75 400 aaPredicted RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 C12orf66Q96MD2 445 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 FCRL4Q96PJ5 515 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 RBSNQ9H1K0 784 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 OR52A5Q9H2C5 316 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ACTL8Q9H568 366 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 KIR3DX1Q9H7L2 352 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PDE7BQ9NP56 450 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 FGF21Q9NSA1 209 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PIH1D1Q9NWS0 290 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 TLK1Q9UKI8 766 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 RARRES3Q9UL19 164 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 ACSL5Q9ULC5 683 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PLAAQ9Y263 795 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 TP53TG5Q9Y2B4 290 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 R3HDM2Q9Y2K5 976 aaKnown RBP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.84□□□□□ -1.31
HDAC3-207ENST00000475549 PRSS21Q9Y6M0 314 aa6.84□□□□□ -1.31
HDAC3-207ENST00000475549 IGLV3-16A0A075B6K0 115 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TRBV5-4A0A0C4DH59 114 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms