RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CCR5P51681 352 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 HK2P52789 917 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 HK3P52790 923 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CTSCP53634 463 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ABCE1P61221 599 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 IRX4P78413 519 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CDKL1Q00532 357 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 RCN2Q14257 317 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 TSNQ15631 228 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF678Q5SXM1 525 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 GKAP1Q5VSY0 366 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SEL1L3Q68CR1 1132 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 TTC23LQ6PF05 361 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 Q6ZS52 159 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SPATA21Q7Z572 469 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 C11orf96Q7Z7L8 435 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ADAMTSL2Q86TH1 951 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ZNF547Q8IVP9 402 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 KLHDC8AQ8IYD2 350 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 OXR1Q8N573 874 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CCDC63Q8NA47 563 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 PLA2G15Q8NCC3 412 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 PDPRQ8NCN5 879 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 OR2T34Q8NGX1 318 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ASZ1Q8WWH4 475 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SREK1Q8WXA9 508 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ASB11Q8WXH4 323 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 GLMNQ92990 594 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SGF29Q96ES7 293 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 LINGO1Q96FE5 620 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 DCUN1D1Q96GG9 259 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 HIC2Q96JB3 615 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SEC16BQ96JE7 1060 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SCYL1Q96KG9 808 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CNDP1Q96KN2 507 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ELAC2Q9BQ52 826 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 PLCD4Q9BRC7 762 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SIKE1Q9BRV8 207 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CCM2Q9BSQ5 444 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 IER2Q9BTL4 223 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SLC12A9Q9BXP2 914 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SLC17A9Q9BYT1 436 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ZCCHC2Q9C0B9 1178 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 SLC6A17Q9H1V8 727 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ALG9Q9H6U8 611 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 LMAN1LQ9HAT1 526 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 KCNK13Q9HB14 408 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 POLMQ9NP87 494 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 MBNL1Q9NR56 388 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 KLHL14Q9P2G3 628 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 CPSF2Q9P2I0 782 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 ATXN10Q9UBB4 475 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 NCKAP1Q9Y2A7 1128 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 FNDC3AQ9Y2H6 1198 aaKnown RBP6.5□□□□□ -1.37
ATG4A-207ENST00000474825 OARD1Q9Y530 152 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 PLXNB3Q9ULL4 1909 aa6.5□□□□□ -1.37
ATG4A-207ENST00000474825 VCANP13611 3396 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 FAM86C2PA6NEL3 165 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 NEMP2A6NFY4 417 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 CDC7O00311 574 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 BTN3A1O00481 513 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TOR1BO14657 336 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 LIN7AO14910 233 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RAD51BO15315 384 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SIAH2O43255 324 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 KCNJ13O60928 360 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 MTX2O75431 263 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 CDK14O94921 469 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PCDH8O95206 1070 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TRIM16O95361 564 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 MATN4O95460 622 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PAK4O96013 591 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 FGF4P08620 206 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RPS17P08708 135 aaKnown RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ENO2P09104 434 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 OXTRP30559 389 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 AKT1P31749 480 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 GGT5P36269 586 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 NUDT1P36639 197 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 MAPK9P45984 424 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 NAGLUP54802 743 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ALDH18A1P54886 795 aaKnown RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 HERVK_113P63132 956 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 CDK3Q00526 305 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PLOD1Q02809 727 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 DMPKQ09013 629 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RPA4Q13156 261 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SP140Q13342 867 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SETDB1Q15047 1291 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 PCBP2Q15366 365 aaKnown RBP eCLIP6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TGFBIQ15582 683 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 UNC50Q53HI1 259 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SPDYAQ5MJ70 313 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 RAET1GQ6H3X3 334 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 TMEM220Q6QAJ8 160 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 ZCCHC23Q6ZST2 131 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 FRMD7Q6ZUT3 714 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 FAM47EQ6ZV65 393 aa6.49□□□□□ -1.37
ATG4A-207ENST00000474825 SPATS2Q86XZ4 545 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms