RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 HGH1Q9BTY7 390 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 MKRN2Q9H000 416 aaKnown RBP19.44■□□□□ 0.7
SSR1-204ENST00000474597 EPHX3Q9H6B9 360 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 TNFRSF12AQ9NP84 129 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 ARL8BQ9NVJ2 186 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 WWOXQ9NZC7 414 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 FAM8A1Q9UBU6 413 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 SERGEFQ9UGK8 458 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 EIF2B4Q9UI10 523 aaKnown RBP19.44■□□□□ 0.7
SSR1-204ENST00000474597 MYO1CO00159 1063 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 ADAM23O75077 832 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 PCCBP05166 539 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 ESRRAP11474 423 aaPredicted RBP19.44■□□□□ 0.7
SSR1-204ENST00000474597 CTSCP53634 463 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 UBAP2LQ14157 1087 aaKnown RBP19.44■□□□□ 0.7
SSR1-204ENST00000474597 PCBP2Q15366 365 aaKnown RBP eCLIP19.44■□□□□ 0.74e-10■■■■■ 32.6
SSR1-204ENST00000474597 PHKG1Q16816 387 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 CLEC6AQ6EIG7 209 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 NEK10Q6ZWH5 1172 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 UBE2R2Q712K3 238 aaPredicted RBP19.44■□□□□ 0.7
SSR1-204ENST00000474597 ESAMQ96AP7 390 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 TMEM159Q96B96 161 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 OR52B2Q96RD2 323 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 CCDC28BQ9BUN5 200 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 CCDC106Q9BWC9 280 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 OR2AG1Q9H205 316 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 TRIM39Q9HCM9 518 aa19.44■□□□□ 0.7
SSR1-204ENST00000474597 AZIN1O14977 448 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 HIST1H2AGP0C0S8 130 aaPredicted RBP19.43■□□□□ 0.7
SSR1-204ENST00000474597 T-ENOLP0DO92 83 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 HIST1H2ADP20671 130 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 CALB2P22676 271 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 PBLDP30039 288 aaPredicted RBP19.43■□□□□ 0.7
SSR1-204ENST00000474597 RPIAP49247 311 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 BTKQ06187 659 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 LSM12Q3MHD2 195 aaKnown RBP19.43■□□□□ 0.7
SSR1-204ENST00000474597 TTC31Q49AM3 519 aaPredicted RBP19.43■□□□□ 0.7
SSR1-204ENST00000474597 ADGRG6Q86SQ4 1221 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 TRAPPC5Q8IUR0 188 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 OR14C36Q8NHC7 312 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 AGAP11Q8TF27 550 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 MSANTD3Q96H12 275 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 HIC2Q96JB3 615 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 HIST1H2AHQ96KK5 128 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 HIST1H2AJQ99878 128 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 H2AFJQ9BTM1 129 aa19.43■□□□□ 0.7
SSR1-204ENST00000474597 A0A1W2PQF6 199 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 CFAP73A6NFT4 308 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 E2F3O00716 465 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 JUNP05412 331 aaKnown RBP19.42■□□□□ 0.7
SSR1-204ENST00000474597 ENO1P06733 434 aaKnown RBP19.42■□□□□ 0.7
SSR1-204ENST00000474597 FGF4P08620 206 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 ANXA5P08758 320 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 ENO2P09104 434 aaPredicted RBP19.42■□□□□ 0.7
SSR1-204ENST00000474597 COL9A1P20849 921 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 CYP2A7P20853 494 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 ARL1P40616 181 aaPredicted RBP19.42■□□□□ 0.7
SSR1-204ENST00000474597 SP140Q13342 867 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 FBXO43Q4G163 708 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 PNCKQ6P2M8 343 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 VRK3Q8IV63 474 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 FAM3CQ92520 227 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 ZNF514Q96K75 400 aaPredicted RBP19.42■□□□□ 0.7
SSR1-204ENST00000474597 MEAF6Q9HAF1 191 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 PARVBQ9HBI1 364 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 PTBP2Q9UKA9 531 aaKnown RBP19.42■□□□□ 0.7
SSR1-204ENST00000474597 SCML1Q9UN30 329 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 F5P12259 2224 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 TRIOBPQ9H2D6 2365 aa19.42■□□□□ 0.7
SSR1-204ENST00000474597 PRR23AA6NEV1 266 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 CAPN14A8MX76 684 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 PRR5-ARHGAP8B1AHC4 643 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 PPP6CO00743 305 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 SLC16A5O15375 505 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 NARSO43776 548 aaKnown RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 VEGFDO43915 354 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 GPC4O75487 556 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 SLCO2B1O94956 709 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 HSPA7P48741 367 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 RPS21P63220 83 aaKnown RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 ARHGAP8P85298 464 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 BCL7AQ4VC05 210 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 PLA2G15Q8NCC3 412 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 CEP70Q8NHQ1 597 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 RPLP0P6Q8NHW5 317 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ASB11Q8WXH4 323 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 DLG3Q92796 817 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 HLA-CQ95604 372 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 SIPA1Q96FS4 1042 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 LENG8Q96PV6 779 aaPredicted RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 SLC6A17Q9H1V8 727 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ZBTB26Q9HCK0 441 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ARL15Q9NXU5 204 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ANGPTL3Q9Y5C1 460 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 SDHDO14521 159 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 CCNT2O60583 730 aaKnown RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 ACADMP11310 421 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 SGCGQ13326 291 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 C18orf21Q32NC0 220 aaPredicted RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 CDKL4Q5MAI5 379 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms