RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 FAM8A1Q9UBU6 413 aa18.13■□□□□ 0.49
COL7A1-209ENST00000474432 SLC24A2Q9UI40 661 aa18.13■□□□□ 0.49
COL7A1-209ENST00000474432 CRLS1Q9UJA2 301 aa18.13■□□□□ 0.49
COL7A1-209ENST00000474432 KLHL33A6NCF5 533 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 OR5K3A6NET4 321 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 ZIC2O95409 532 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-209ENST00000474432 AP2A1O95782 977 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 POLBP06746 335 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 ATP1B2P14415 290 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-209ENST00000474432 FOLR1P15328 257 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 ITGALP20701 1170 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 OASLQ15646 514 aaKnown RBP18.12■□□□□ 0.49
COL7A1-209ENST00000474432 GPR33Q49SQ1 333 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 CFAP206Q8IYR0 622 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 TAB3Q8N5C8 712 aaPredicted RBP18.12■□□□□ 0.49
COL7A1-209ENST00000474432 RNF10Q8N5U6 811 aaKnown RBP18.12■□□□□ 0.49
COL7A1-209ENST00000474432 ZFPM2Q8WW38 1151 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 COPS8Q99627 209 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 MAP3K3Q99759 626 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 TRIT1Q9H3H1 467 aaKnown RBP18.12■□□□□ 0.49
COL7A1-209ENST00000474432 KIR3DX1Q9H7L2 352 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 LRRC40Q9H9A6 602 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 ZDHHC3Q9NYG2 299 aa18.12■□□□□ 0.49
COL7A1-209ENST00000474432 C17orf113A0A1B0GUU1 675 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 MROH6A6NGR9 719 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 ZNF891A8MT65 544 aaPredicted RBP18.11■□□□□ 0.49
COL7A1-209ENST00000474432 SPAG6O75602 509 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 ACRV1P26436 265 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 OAS2P29728 719 aaKnown RBP18.11■□□□□ 0.49
COL7A1-209ENST00000474432 NFATC3Q12968 1075 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 KCNAB1Q14722 419 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 POU6F1Q14863 301 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 SERPINA9Q86WD7 417 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 ESX1Q8N693 406 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 GALNT6Q8NCL4 622 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 HM13Q8TCT9 377 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 UBXN4Q92575 508 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 ELMO2Q96JJ3 720 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 PPM1MQ96MI6 270 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 NRTNQ99748 197 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 ARHGAP9Q9BRR9 750 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 ULBP3Q9BZM4 244 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 OR52A5Q9H2C5 316 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 GEMIN8Q9NWZ8 242 aaKnown RBP18.11■□□□□ 0.49
COL7A1-209ENST00000474432 MRPS18BQ9Y676 258 aaKnown RBP18.11■□□□□ 0.49
COL7A1-209ENST00000474432 RPS6KL1Q9Y6S9 549 aa18.11■□□□□ 0.49
COL7A1-209ENST00000474432 J3QKU1 62 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 LIASO43766 372 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 KIAA0754O94854 1291 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 SLC35G4P0C7Q5 338 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 NFKB2Q00653 900 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 PLCL1Q15111 1095 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 P3H1Q32P28 736 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
COL7A1-209ENST00000474432 BORAQ6PGQ7 559 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 PRUNE1Q86TP1 453 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 TXLNBQ8N3L3 684 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 CLDN19Q8N6F1 224 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 STYXQ8WUJ0 223 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 HEXDCQ8WVB3 486 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 DCUN1D1Q96GG9 259 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 COG4Q9H9E3 785 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 HRASLS2Q9NWW9 162 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 SPTBP11277 2137 aa18.1■□□□□ 0.49
COL7A1-209ENST00000474432 PYCARD-AS1I3L0S3 204 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 EBLN1P0CF75 366 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 RALBP11234 206 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 PDHA2P29803 388 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 GRIA1P42261 906 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 KPNA2P52292 529 aaKnown RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 CDC20Q12834 499 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 DBN1Q16643 649 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 CRTC2Q53ET0 693 aaPredicted RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 ZRANB3Q5FWF4 1079 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 ATP1A1-AS1Q5TC04 95 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 KLHL35Q6PF15 583 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 FBXO38Q6PIJ6 1188 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 C6orf15Q6UXA7 325 aaPredicted RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 SLC13A5Q86YT5 568 aaPredicted RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 D2HGDHQ8N465 521 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 GLIS1Q8NBF1 620 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 OR52K1Q8NGK4 314 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 KIAA1143Q96AT1 154 aaPredicted RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 CD180Q99467 661 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 CCM2Q9BSQ5 444 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 AKIRIN1Q9H9L7 192 aaPredicted RBP18.09■□□□□ 0.49
COL7A1-209ENST00000474432 ETNK1Q9HBU6 452 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 PRSS21Q9Y6M0 314 aa18.09■□□□□ 0.49
COL7A1-209ENST00000474432 MYO18BQ8IUG5 2567 aa18.08■□□□□ 0.49
COL7A1-209ENST00000474432 CCDC78A2IDD5 438 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 OR6C74A6NCV1 312 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 TLCD2A6NGC4 264 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 OR51F1A6NGY5 319 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 PSMD3O43242 534 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 SUN1O94901 812 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 PRKAR1AP10644 381 aa18.08■□□□□ 0.48
COL7A1-209ENST00000474432 STIP1P31948 543 aaKnown RBP18.08■□□□□ 0.48
COL7A1-209ENST00000474432 ARCN1P48444 511 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms