RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 AQP6Q13520 282 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CCDC85BQ15834 202 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ME3Q16798 604 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PAN2Q504Q3 1202 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF19Q5SWL8 479 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 LRRC38Q5VT99 294 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DHRS4L2Q6PKH6 230 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 LYPD8Q6UX82 237 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DPP8Q6V1X1 898 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 SPRED1Q7Z699 444 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ANKRD46Q86W74 232 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SYNE4Q8N205 404 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ANKRD44Q8N8A2 993 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBR3-208ENST00000474426 L3MBTL4Q8NA19 623 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PLA2G15Q8NCC3 412 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 C9orf43Q8TAL5 461 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ACTRT1Q8TDG2 376 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DPF1Q92782 380 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FAM162AQ96A26 154 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ADIPOR1Q96A54 375 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 RASD2Q96D21 266 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MTERF3Q96E29 417 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ZNF486Q96H40 463 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 PLEKHA8Q96JA3 519 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ZNF285Q96NJ3 590 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DIRC2Q96SL1 478 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MXRA8Q9BRK3 442 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TMEM175Q9BSA9 504 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ADAM7Q9H2U9 754 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 VCX2Q9H322 139 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FOXP1Q9H334 677 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 IFT46Q9NQC8 304 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 XPNPEP1Q9NQW7 623 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 POT1Q9NUX5 634 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 KLHL28Q9NXS3 571 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SERGEFQ9UGK8 458 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 BTNL2Q9UIR0 455 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 KCNH3Q9ULD8 1083 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 RHBDD3Q9Y3P4 386 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NFS1Q9Y697 457 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 STK36Q9NRP7 1315 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ASB14A6NK59 587 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 HRO43593 1189 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SUSD5O60279 629 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TOM1O60784 492 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TJP3O95049 919 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 APOA1P02647 267 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 AHSGP02765 367 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 KRT8P05787 483 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 YES1P07947 543 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 OR2T7P0C7T2 308 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ACPPP15309 386 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 C5AR1P21730 350 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CSNK1EP49674 416 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 PKNOX1P55347 436 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ERVK-8P63133 956 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 RING1Q06587 406 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CDH17Q12864 832 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SF3A3Q12874 501 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBR3-208ENST00000474426 TRAF2Q12933 501 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MAMLD1Q13495 774 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CAMK2GQ13555 558 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ITGA9Q13797 1035 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TCHHL1Q5QJ38 904 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 WBP2NLQ6ICG8 309 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 STYK1Q6J9G0 422 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FAM83HQ6ZRV2 1179 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 MTSS1LQ765P7 747 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NET1Q7Z628 596 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ETFBKMTQ8IXQ9 262 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ENTHD1Q8IYW4 607 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 SIX6OS1Q8N1H7 587 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 RIBC1Q8N443 379 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 LRRC18Q8N456 261 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 METTL25Q8N6Q8 603 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 Q8N9G6 341 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 IL17RCQ8NAC3 791 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CATSPER1Q8NEC5 780 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 OR4A15Q8NGL6 344 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ELP5Q8TE02 316 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 FOXRED1Q96CU9 486 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 DAZAP1Q96EP5 407 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 MYO19Q96H55 970 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 CCDC120Q96HB5 630 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 TGS1Q96RS0 853 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 MAPKAP1Q9BPZ7 522 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NAA11Q9BSU3 229 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ANGPTL4Q9BY76 406 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 NLNQ9BYT8 704 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 PABPC3Q9H361 631 aaKnown RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 ASB7Q9H672 318 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 GPRC5DQ9NZD1 345 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 MGAT4CQ9UBM8 478 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 DNAJB11Q9UBS4 358 aa3.44□□□□□ -1.86
UBR3-208ENST00000474426 ASTN2O75129 1339 aaPredicted RBP3.44□□□□□ -1.86
UBR3-208ENST00000474426 PSME4Q14997 1843 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 DICER1Q9UPY3 1922 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR2AT4A6NND4 320 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms