RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 BPGMP07738 259 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 FDXRP22570 491 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 RPL5P46777 297 aaKnown RBP14.58□□□□□ -0.08
LMNA-213ENST00000473598 ASPHQ12797 758 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 EOGTQ5NDL2 527 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 HENMT1Q5T8I9 393 aaKnown RBP14.58□□□□□ -0.08
LMNA-213ENST00000473598 AGBL4Q5VU57 503 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ZNF852Q6ZMS4 543 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ADGRG6Q86SQ4 1221 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 TREML1Q86YW5 311 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 TMPRSS6Q8IU80 811 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 NUDCD3Q8IVD9 361 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 NRSN1Q8IZ57 195 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 PLD6Q8N2A8 252 aaKnown RBP14.58□□□□□ -0.08
LMNA-213ENST00000473598 HDDC3Q8N4P3 179 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 RAB3IL1Q8TBN0 382 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 SCAMP4Q969E2 229 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 MCUR1Q96AQ8 359 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 P2RY12Q9H244 342 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 NDE1Q9NXR1 346 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 DCTN4Q9UJW0 460 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 TRPM6Q9BX84 2022 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 A0A087X1B8 175 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 MAGEB3O15480 346 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 PI15O43692 258 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 COL6A2P12110 1019 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 PKMP14618 531 aaKnown RBP14.58□□□□□ -0.08
LMNA-213ENST00000473598 ANPEPP15144 967 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ZNF7P17097 686 aaPredicted RBP14.58□□□□□ -0.08
LMNA-213ENST00000473598 RAP1GDS1P52306 607 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ARPC4P59998 168 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 TIAL1Q01085 375 aaKnown RBP eCLIP14.58□□□□□ -0.08
LMNA-213ENST00000473598 BST1Q10588 318 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 MED21Q13503 144 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ATG16L1Q676U5 607 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 BORAQ6PGQ7 559 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.58□□□□□ -0.08
LMNA-213ENST00000473598 CYP2U1Q7Z449 544 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 RBFAQ8N0V3 343 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 TRAM1L1Q8N609 369 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ULK4Q96C45 1275 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 DTD2Q96FN9 168 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 C7orf26Q96N11 449 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ZSCAN5AQ9BUG6 496 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 C1QTNF1Q9BXJ1 281 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 ABCG8Q9H221 673 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 KCNK13Q9HB14 408 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 LTB4R2Q9NPC1 389 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 SERGEFQ9UGK8 458 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 EMCNQ9ULC0 261 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 MMP17Q9ULZ9 603 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 COMMD10Q9Y6G5 202 aa14.58□□□□□ -0.08
LMNA-213ENST00000473598 A0A1W2PP55 124 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 PRMT5O14744 637 aaPredicted RBP14.57□□□□□ -0.08
LMNA-213ENST00000473598 MMP20O60882 483 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 WISP3O95389 354 aaPredicted RBP14.57□□□□□ -0.08
LMNA-213ENST00000473598 ESR1P03372 595 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 DNTTP04053 509 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 C7P10643 843 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 C6P13671 934 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 RPS3P23396 243 aaKnown RBP eCLIP14.57□□□□□ -0.086e-9■■■■□ 22.1
LMNA-213ENST00000473598 TAS2R38P59533 333 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 CREB5Q02930 508 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 RELAQ04206 551 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 CTSL3PQ5NE16 218 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 N4BP2L1Q5TBK1 243 aaPredicted RBP14.57□□□□□ -0.08
LMNA-213ENST00000473598 CES4AQ5XG92 561 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 ZNF687Q8N1G0 1237 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 CXorf40AQ8TE69 158 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 FAM131CQ96AQ9 280 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 PTCD3Q96EY7 689 aaKnown RBP14.57□□□□□ -0.08
LMNA-213ENST00000473598 SHDQ96IW2 340 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 RIOK2Q9BVS4 552 aaKnown RBP14.57□□□□□ -0.08
LMNA-213ENST00000473598 BOCQ9BWV1 1114 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 POPDC3Q9HBV1 291 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 GPAMQ9HCL2 828 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 ZNF358Q9NW07 568 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 SMOXQ9NWM0 555 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 ZDHHC3Q9NYG2 299 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 TMEM216Q9P0N5 145 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 SCHIP1Q9P0W5 487 aaPredicted RBP14.57□□□□□ -0.08
LMNA-213ENST00000473598 MED16Q9Y2X0 877 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 COQ6Q9Y2Z9 468 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 PCDHB1Q9Y5F3 818 aa14.57□□□□□ -0.08
LMNA-213ENST00000473598 A0A0G2JND7 137 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 FAM170BA6NMN3 283 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 GYG2O15488 501 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 TSPAN6O43657 245 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 RNASEH2AO75792 299 aaKnown RBP14.56□□□□□ -0.08
LMNA-213ENST00000473598 DCNP07585 359 aaKnown RBP14.56□□□□□ -0.08
LMNA-213ENST00000473598 CD9P21926 228 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 AP2B1P63010 937 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 TBL3Q12788 808 aaKnown RBP14.56□□□□□ -0.08
LMNA-213ENST00000473598 CHI3L2Q15782 390 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 ZNF284Q2VY69 593 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 ZNF362Q5T0B9 420 aaPredicted RBP14.56□□□□□ -0.08
LMNA-213ENST00000473598 C16orf46Q6P387 395 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 RBM44Q6ZP01 1051 aaKnown RBP14.56□□□□□ -0.08
LMNA-213ENST00000473598 CLNKQ7Z7G1 428 aa14.56□□□□□ -0.08
LMNA-213ENST00000473598 CENPLQ8N0S6 344 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms