RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NKAIN2Q5VXU1 208 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 CASC4Q6P4E1 433 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 WASH2PQ6VEQ5 465 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 B3GNT8Q7Z7M8 397 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 ZNF605Q86T29 641 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 CFAP206Q8IYR0 622 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 EIF1ADQ8N9N8 165 aaKnown RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 NOA1Q8NC60 698 aaKnown RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 NAT6Q93015 286 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 ZNF669Q96BR6 464 aaPredicted RBP12.85□□□□□ -0.35
TPM3-216ENST00000473036 WBP1Q96G27 269 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 DCUN1D1Q96GG9 259 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 SNF8Q96H20 258 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 RMDN2Q96LZ7 410 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 NRTNQ99748 197 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 P2RY12Q9H244 342 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 DPH5Q9H2P9 285 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 WASH6PQ9NQA3 447 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 CPNE7Q9UBL6 633 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 PSMD13Q9UNM6 376 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 RPS6KL1Q9Y6S9 549 aa12.85□□□□□ -0.35
TPM3-216ENST00000473036 C1QL1O75973 258 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 RPLP0P05388 317 aaKnown RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 XRCC1P18887 633 aaPredicted RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 CD1CP29017 333 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 CSF2RBP32927 897 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 NSG1P42857 185 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 PREPP48147 710 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 SLC7A5Q01650 507 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 CUL1Q13616 776 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 RPE65Q16518 533 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 TYSND1Q2T9J0 566 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 CTSL3PQ5NE16 218 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 DUS1LQ6P1R4 473 aaKnown RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 ZDHHC24Q6UX98 284 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 CENPUQ71F23 418 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 GPR155Q7Z3F1 870 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 CCNJLQ8IV13 435 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 DENND6AQ8IWF6 608 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 HEXDCQ8WVB3 486 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 LPGAT1Q92604 370 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 STAMBPL1Q96FJ0 436 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 BIRC8Q96P09 236 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 INSM2Q96T92 566 aaPredicted RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 EBNA1BP2Q99848 306 aaKnown RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 CCM2Q9BSQ5 444 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 LRRC1Q9BTT6 524 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 TBC1D10AQ9BXI6 508 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 FOXP3Q9BZS1 431 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 WWP1Q9H0M0 922 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 COG4Q9H9E3 785 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 SARS2Q9NP81 518 aaKnown RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 OGFRQ9NZT2 677 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 TMEM9Q9P0T7 183 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 SLC17A6Q9P2U8 582 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 CFAP20Q9Y6A4 193 aaKnown RBP12.84□□□□□ -0.35
TPM3-216ENST00000473036 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 TEX264Q9Y6I9 313 aa12.84□□□□□ -0.35
TPM3-216ENST00000473036 BSNQ9UPA5 3926 aa12.83□□□□□ -0.35
TPM3-216ENST00000473036 PTPRQQ9UMZ3 2332 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 KIR2DS5A0A0G2JLQ3 304 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 A0A0G2JNG1 304 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 MAGEB16A2A368 324 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 PDZK1P1A8MUH7 402 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 E7ESA3 106 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 KIR2DS3K7RE56 304 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 KCNJ13O60928 360 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 USP1O94782 785 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 AP2A2O94973 939 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 POLBP06746 335 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 RALBP11234 206 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 PLA2G2AP14555 144 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 ITGB6P18564 788 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 IDSP22304 550 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 ALDH4A1P30038 563 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 ELK3P41970 407 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 HHEXQ03014 270 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 CBLBQ13191 982 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 CRYMQ14894 314 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 KIR2DS5Q14953 304 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 BBS9Q3SYG4 887 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 ARMC3Q5W041 872 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 CAPRIN2Q6IMN6 1127 aaKnown RBP12.83□□□□□ -0.36
TPM3-216ENST00000473036 CILP2Q8IUL8 1156 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 VRK3Q8IV63 474 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 KRT222Q8N1A0 295 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 LRRN4CLQ8ND94 238 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 OR6C4Q8NGE1 309 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 JPH3Q8WXH2 748 aaPredicted RBP12.83□□□□□ -0.36
TPM3-216ENST00000473036 FGF11Q92914 225 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 OR52A5Q9H2C5 316 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 RDH14Q9HBH5 336 aa12.83□□□□□ -0.36
TPM3-216ENST00000473036 WHRNQ9P202 907 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms