RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FOLR1P15328 257 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 TCN2P20062 427 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 DLSTP36957 453 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 HADHAP40939 763 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 PLCL1Q15111 1095 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 PARP6Q2NL67 630 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 PEX26Q7Z412 305 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 SNX20Q7Z614 316 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 KMT5CQ86Y97 462 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 CFAP206Q8IYR0 622 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 NXPE1Q8N323 547 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 TTC13Q8NBP0 860 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 NAT14Q8WUY8 206 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 HEXDCQ8WVB3 486 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 DCUN1D1Q96GG9 259 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 CD180Q99467 661 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 MAP3K3Q99759 626 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 BAG1Q99933 345 aaPredicted RBP14.93□□□□□ -0.02
VTI1A-203ENST00000472892 CCM2Q9BSQ5 444 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 PDE7BQ9NP56 450 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 HRASLS2Q9NWW9 162 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 CRLS1Q9UJA2 301 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 CROTQ9UKG9 612 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 AMFRQ9UKV5 643 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 MRPS18BQ9Y676 258 aaKnown RBP14.93□□□□□ -0.02
VTI1A-203ENST00000472892 MIF4GDA9UHW6 222 aaKnown RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 MT-ND3P03897 115 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 POLBP06746 335 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 CCNYL3P0C7X3 344 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 ATP1B2P14415 290 aaPredicted RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 ITGALP20701 1170 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 PRLHRP49683 370 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 CSRP3P50461 194 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 TMPRSS15P98073 1019 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 KLF1Q13351 362 aaPredicted RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 DEFB109BQ30KR1 87 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 GPR33Q49SQ1 333 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 KIAA1328Q86T90 577 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 TMEM139Q8IV31 216 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 SYCE1Q8N0S2 351 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 UBL4BQ8N7F7 174 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 FAM71DQ8N9W8 422 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 SIDT2Q8NBJ9 832 aaKnown RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 APOBEC4Q8WW27 367 aaKnown RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 LRRC45Q96CN5 670 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 RNF31Q96EP0 1072 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 STAMBPL1Q96FJ0 436 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 C12orf66Q96MD2 445 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 COPS8Q99627 209 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 FAM96AQ9H5X1 160 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 CLMPQ9H6B4 373 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 KIR3DX1Q9H7L2 352 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 RARRES3Q9UL19 164 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 PADI1Q9ULC6 663 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 PCDHGA6Q9Y5G7 932 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 COLEC10Q9Y6Z7 277 aa14.92□□□□□ -0.02
VTI1A-203ENST00000472892 ASH1LQ9NR48 2969 aaKnown RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 FLNBO75369 2602 aaKnown RBP14.92□□□□□ -0.02
VTI1A-203ENST00000472892 ZNF106Q9H2Y7 1883 aaKnown RBP14.91□□□□□ -0.02
VTI1A-203ENST00000472892 IGLV3-16A0A075B6K0 115 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 TRBV5-4A0A0C4DH59 114 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 GOLGA6L9A6NEM1 432 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 TLCD2A6NGC4 264 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 CFAP99D6REC4 459 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 H7C0S8 307 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 DDX3YO15523 660 aaKnown RBP14.91□□□□□ -0.02
VTI1A-203ENST00000472892 TIAF1O95411 115 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 METTL18O95568 372 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 RECKO95980 971 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 SLC35G4P0C7Q5 338 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 MC4RP32245 332 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 HSD11B2P80365 405 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 ACY1Q03154 408 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 TUBB3Q13509 450 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
VTI1A-203ENST00000472892 ATP1A1-AS1Q5TC04 95 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 PWWP2BQ6NUJ5 590 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 DUS1LQ6P1R4 473 aaKnown RBP14.91□□□□□ -0.02
VTI1A-203ENST00000472892 C16orf46Q6P387 395 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 CERS6Q6ZMG9 384 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 ARHGEF18Q6ZSZ5 1173 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 OOSP2Q86WS3 158 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 CARFQ8N187 725 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 D2HGDHQ8N465 521 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 LILRA3Q8N6C8 439 aaPredicted RBP14.91□□□□□ -0.02
VTI1A-203ENST00000472892 SLC35B2Q8TB61 432 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 HM13Q8TCT9 377 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 RMDN2Q96LZ7 410 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 LHX9Q9NQ69 397 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 ZDHHC3Q9NYG2 299 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 LNPEPQ9UIQ6 1025 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 KCND3Q9UK17 655 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 PCDHB3Q9Y5E6 796 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 SPTA1P02549 2419 aa14.91□□□□□ -0.02
VTI1A-203ENST00000472892 SETXQ7Z333 2677 aaKnown RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 UBA6A0AVT1 1052 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 OR6C74A6NCV1 312 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 CCL22O00626 93 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms