RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ABRQ12979 859 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 NFE2L1Q14494 772 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 KYNUQ16719 465 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 IZUMO3Q5VZ72 239 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 TIGD7Q6NT04 549 aaPredicted RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 DUS1LQ6P1R4 473 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 FAM198BQ6UWH4 519 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 MED25Q71SY5 747 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 DSELQ8IZU8 1212 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 PLD5Q8N7P1 536 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 ENDOVQ8N8Q3 282 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 TMEM102Q8N9M5 508 aaPredicted RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
VCL-204ENST00000472585 RAPGEF5Q92565 580 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 CXorf40BQ96DE9 158 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 IMP4Q96G21 291 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 LURAP1Q96LR2 239 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 SMAD5Q99717 465 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 BARD1Q99728 777 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 ZBTB20Q9HC78 741 aaPredicted RBP9.09□□□□□ -0.95
VCL-204ENST00000472585 IL26Q9NPH9 171 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 C5AR2Q9P296 337 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 IP6K2Q9UHH9 426 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 ANAPC7Q9UJX3 599 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 TCFL5Q9UL49 500 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 SNX7Q9UNH6 387 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 NTNG1Q9Y2I2 539 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 ZNF711Q9Y462 761 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 DCHS2Q6V1P9 2916 aa9.09□□□□□ -0.95
VCL-204ENST00000472585 MYO7BQ6PIF6 2116 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 A0A087X0T9 212 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 OR5K3A6NET4 321 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 C3orf70A6NLC5 250 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 MEN1O00255 615 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 GAPDHSO14556 408 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 ZG16O60844 167 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 MT-CYBP00156 380 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 ALPPP05187 535 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 KLK3P07288 261 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 FAM228BP0C875 321 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 GJC1P36383 396 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 ARL4DP49703 201 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 KPNA2P52292 529 aaKnown RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 TUBB4BP68371 445 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 IFI35P80217 286 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 HSD11B2P80365 405 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 ACY1Q03154 408 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 PPIDQ08752 370 aaKnown RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 DMPKQ09013 629 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 TUBB2AQ13885 445 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 PTPRCAPQ14761 206 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 PCSK7Q16549 785 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 PDPK2PQ6A1A2 396 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 TMEM220Q6QAJ8 160 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 NPNTQ6UXI9 565 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 SPOCD1Q6ZMY3 1216 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 MICALCLQ6ZW33 695 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 RBM12BQ8IXT5 1001 aaKnown RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 TTC30BQ8N4P2 665 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 LILRA3Q8N6C8 439 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 BEND7Q8N7W2 519 aaPredicted RBP9.08□□□□□ -0.96
VCL-204ENST00000472585 GLIS1Q8NBF1 620 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 KCTD6Q8NC69 237 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 CCNYQ8ND76 341 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 ST6GALNAC3Q8NDV1 305 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 OR1L3Q8NH93 324 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 UBE2Q2Q8WVN8 375 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 HDAC11Q96DB2 347 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 SGSM3Q96HU1 749 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 VPS35Q96QK1 796 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 TUBB2BQ9BVA1 445 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 TMUB1Q9BVT8 246 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 TLR10Q9BXR5 811 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 ADGRE3Q9BY15 652 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 NLNQ9BYT8 704 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 GPR63Q9BZJ6 419 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 HRASLS2Q9NWW9 162 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 CHMP5Q9NZZ3 219 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 COPG2Q9UBF2 871 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 NENFQ9UMX5 172 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 OSGIN2Q9Y236 505 aa9.08□□□□□ -0.96
VCL-204ENST00000472585 OR6C74A6NCV1 312 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 TLCD2A6NGC4 264 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 SLC9B1P1A6NJY1 282 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 HCRTR1O43613 425 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 BUD23O43709 281 aaKnown RBP9.07□□□□□ -0.96
VCL-204ENST00000472585 SGTAO43765 313 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 KLHL41O60662 606 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 DIAPH2O60879 1101 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 CPNE3O75131 537 aaKnown RBP9.07□□□□□ -0.96
VCL-204ENST00000472585 KLF7O75840 302 aaPredicted RBP9.07□□□□□ -0.96
VCL-204ENST00000472585 CTSBP07858 339 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 RAB40ALP0C0E4 278 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 KDELR1P24390 212 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 CD68P34810 354 aaPredicted RBP9.07□□□□□ -0.96
VCL-204ENST00000472585 PTGER4P35408 488 aa9.07□□□□□ -0.96
VCL-204ENST00000472585 VAV2P52735 878 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms