RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NF1P21359 2839 aa18.48■□□□□ 0.55
SORT1-203ENST00000471996 MASP2O00187 686 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 CDH3P22223 829 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 TSFMP43897 325 aaKnown RBP18.47■□□□□ 0.55
SORT1-203ENST00000471996 PREPP48147 710 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 ARCN1P48444 511 aaKnown RBP18.47■□□□□ 0.55
SORT1-203ENST00000471996 XRCC4Q13426 336 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 NFE2L1Q14494 772 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 KRT81Q14533 505 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 ATP13A5Q4VNC0 1218 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 NCBP2-AS2Q69YL0 99 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 GDAP1Q8TB36 358 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 PPP4R1Q8TF05 950 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 LRRN4Q8WUT4 740 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 TRAPPC9Q96Q05 1148 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 C17orf62Q9BQA9 187 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 MRPL47Q9HD33 250 aaKnown RBP18.47■□□□□ 0.55
SORT1-203ENST00000471996 SLC24A2Q9UI40 661 aa18.47■□□□□ 0.55
SORT1-203ENST00000471996 PIKFYVEQ9Y2I7 2098 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 A0A1W2PQJ5 194 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 E7EQ34 232 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 ZNF749O43361 778 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 HBQ1P09105 142 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 CD48P09326 243 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 GZMAP12544 262 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 POLR2CP19387 275 aaPredicted RBP18.46■□□□□ 0.55
SORT1-203ENST00000471996 SLC25A11Q02978 314 aaKnown RBP18.46■□□□□ 0.55
SORT1-203ENST00000471996 HIF1AQ16665 826 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 MLIPQ5VWP3 458 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 METRNLQ641Q3 311 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 FAM71BQ8TC56 605 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 COG1Q8WTW3 980 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 RELTQ969Z4 430 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 INSM2Q96T92 566 aaPredicted RBP18.46■□□□□ 0.55
SORT1-203ENST00000471996 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 KIR3DX1Q9H7L2 352 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 ATP13A2Q9NQ11 1180 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 MYO1AQ9UBC5 1043 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 POMT2Q9UKY4 750 aa18.46■□□□□ 0.55
SORT1-203ENST00000471996 PTRH2Q9Y3E5 179 aaKnown RBP18.46■□□□□ 0.55
SORT1-203ENST00000471996 DNMT3AQ9Y6K1 912 aaPredicted RBP18.46■□□□□ 0.55
SORT1-203ENST00000471996 LGALS16A8MUM7 142 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 FOLR3P41439 243 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 CTSCP53634 463 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 PRKAA1Q13131 559 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 PIGHQ14442 188 aaPredicted RBP18.45■□□□□ 0.54
SORT1-203ENST00000471996 CCDC183Q5T5S1 534 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 DUS1LQ6P1R4 473 aaKnown RBP18.45■□□□□ 0.54
SORT1-203ENST00000471996 B4GALNT4Q76KP1 1039 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 RASGEF1AQ8N9B8 481 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 DNAJB14Q8TBM8 379 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 AGAP3Q96P47 875 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 ERGIC2Q96RQ1 377 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 SLX1AQ9BQ83 275 aa18.45■□□□□ 0.54
SORT1-203ENST00000471996 HLA-DPA1P20036 260 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 UBXN1Q04323 297 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 CDC16Q13042 620 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 B3GNTL1Q67FW5 361 aaPredicted RBP18.44■□□□□ 0.54
SORT1-203ENST00000471996 TMEM220Q6QAJ8 160 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 IGFL2Q6UWQ7 119 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 PPP1R32Q7Z5V6 425 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 CNTD1Q8N815 330 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 OR4E2Q8NGC2 313 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 OR2Y1Q8NGV0 311 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 ITLN2Q8WWU7 325 aaPredicted RBP18.44■□□□□ 0.54
SORT1-203ENST00000471996 C12orf66Q96MD2 445 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 GBP5Q96PP8 586 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 ZCCHC2Q9C0B9 1178 aaKnown RBP18.44■□□□□ 0.54
SORT1-203ENST00000471996 WWP1Q9H0M0 922 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 BPIFA1Q9NP55 256 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 CHST11Q9NPF2 352 aa18.44■□□□□ 0.54
SORT1-203ENST00000471996 GPN3Q9UHW5 284 aaPredicted RBP18.44■□□□□ 0.54
SORT1-203ENST00000471996 MATN2O00339 956 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 AURKAO14965 403 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 MAP3K7O43318 606 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 CD63P08962 238 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 CBSLP0DN79 551 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 MYBL1P10243 752 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 ST6GAL1P15907 406 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 MX2P20592 715 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 CBSP35520 551 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 LMAN1P49257 510 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 ARSEP51690 589 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 AIMP2Q13155 320 aaKnown RBP18.43■□□□□ 0.54
SORT1-203ENST00000471996 ZNF169Q14929 603 aaPredicted RBP18.43■□□□□ 0.54
SORT1-203ENST00000471996 TESK1Q15569 626 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 CYP2A13Q16696 494 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 PARP9Q8IXQ6 854 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 BEND7Q8N7W2 519 aaPredicted RBP18.43■□□□□ 0.54
SORT1-203ENST00000471996 NIPA2Q8N8Q9 360 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 PTERQ96BW5 349 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 TRIM11Q96F44 468 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 FANCLQ9NW38 375 aa18.43■□□□□ 0.54
SORT1-203ENST00000471996 CCDC168Q8NDH2 2452 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 OR2AG2A6NM03 316 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 KCNK1O00180 336 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 SNRPB2P08579 225 aaKnown RBP18.42■□□□□ 0.54
SORT1-203ENST00000471996 SPTBP11277 2137 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 COX6B1P14854 86 aa18.42■□□□□ 0.54
SORT1-203ENST00000471996 PRDX3P30048 256 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms