RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SNX16P57768 344 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 RRS1Q15050 365 aaKnown RBP4.08□□□□□ -1.76
CD46-213ENST00000471987 ZRSR2Q15696 482 aaKnown RBP4.08□□□□□ -1.76
CD46-213ENST00000471987 CTU2Q2VPK5 515 aaKnown RBP4.08□□□□□ -1.76
CD46-213ENST00000471987 ACSM2BQ68CK6 577 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 Q6ZSR9 355 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 SLC16A9Q7RTY1 509 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 SMAP1Q8IYB5 467 aaPredicted RBP4.08□□□□□ -1.76
CD46-213ENST00000471987 TMTC2Q8N394 836 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 PERPQ96FX8 193 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 SYT15Q9BQS2 421 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 SMC4Q9NTJ3 1288 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 EHD2Q9NZN4 543 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 TSPYL4Q9UJ04 414 aa4.08□□□□□ -1.76
CD46-213ENST00000471987 IGLV9-49A0A0B4J1Y8 123 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 ZNF197O14709 1029 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 CCNDBP1O95273 360 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 TRIM49P0CI25 452 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 TRIM49CP0CI26 452 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 GATA1P15976 413 aaPredicted RBP4.07□□□□□ -1.76
CD46-213ENST00000471987 TMEM11P17152 192 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 PCGF3Q3KNV8 242 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 XKR6Q5GH73 641 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 GALNT5Q7Z7M9 940 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 GALNT13Q8IUC8 556 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 ZNF843Q8N446 348 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 AMER3Q8N944 861 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 ZNF383Q8NA42 475 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 ZKSCAN4Q969J2 545 aaPredicted RBP4.07□□□□□ -1.76
CD46-213ENST00000471987 UBN1Q9NPG3 1134 aa4.07□□□□□ -1.76
CD46-213ENST00000471987 EIF2S1P05198 315 aaKnown RBP4.06□□□□□ -1.76
CD46-213ENST00000471987 RGS2P41220 211 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 PSMC4P43686 418 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 SP3Q02447 781 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 LGALS3BPQ08380 585 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 P2RY6Q15077 328 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 SNAI3Q3KNW1 292 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 ZNF554Q86TJ5 538 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 DNAJC22Q8N4W6 341 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 TMEM178AQ8NBL3 297 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 ARHGEF2Q92974 986 aaKnown RBP4.06□□□□□ -1.76
CD46-213ENST00000471987 MOAP1Q96BY2 351 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 MAGED4Q96JG8 741 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 P2RY12Q9H244 342 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 CCDC177Q9NQR7 707 aaPredicted RBP4.06□□□□□ -1.76
CD46-213ENST00000471987 MBNL1Q9NR56 388 aaKnown RBP4.06□□□□□ -1.76
CD46-213ENST00000471987 MTMR6Q9Y217 621 aa4.06□□□□□ -1.76
CD46-213ENST00000471987 PLEKHD1A6NEE1 506 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 DNM1LO00429 736 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 CDC123O75794 336 aaPredicted RBP4.05□□□□□ -1.76
CD46-213ENST00000471987 MOCS3O95396 460 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 CLEC3BP05452 202 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 CCR9P51686 369 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 CDR2Q01850 454 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 PRKAA1Q13131 559 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 GPR17Q13304 367 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 ZSCAN23Q3MJ62 389 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 PSRC1Q6PGN9 363 aaPredicted RBP4.05□□□□□ -1.76
CD46-213ENST00000471987 DOK6Q6PKX4 331 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 LSMEM2Q8N112 164 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 HJURPQ8NCD3 748 aaPredicted RBP4.05□□□□□ -1.76
CD46-213ENST00000471987 NSL1Q96IY1 281 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 C1orf74Q96LT6 269 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 ZNF300Q96RE9 604 aaPredicted RBP4.05□□□□□ -1.76
CD46-213ENST00000471987 ZHX2Q9Y6X8 837 aa4.05□□□□□ -1.76
CD46-213ENST00000471987 MED19A0JLT2 244 aaPredicted RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 ATP6V0E1O15342 81 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 HSPA1AP0DMV8 641 aaKnown RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 HSPA1BP0DMV9 641 aaKnown RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 RPS3AP61247 264 aaKnown RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 HNRNPDQ14103 355 aaKnown RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 EIF4A2Q14240 407 aaKnown RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 TBCEQ15813 527 aaPredicted RBP4.04□□□□□ -1.76
CD46-213ENST00000471987 CYP4A22Q5TCH4 519 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 ADALQ6DHV7 355 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 NCEH1Q6PIU2 408 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 SUSD6Q92537 303 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 SLC22A12Q96S37 553 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 MYADMQ96S97 322 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 PKP2Q99959 881 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 NCAPGQ9BPX3 1015 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 LAT2Q9GZY6 243 aa4.04□□□□□ -1.76
CD46-213ENST00000471987 GH2P01242 217 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 CDH2P19022 906 aaPredicted RBP4.03□□□□□ -1.76
CD46-213ENST00000471987 MAGEA11P43364 429 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 TAF13Q15543 124 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 SGSM1Q2NKQ1 1148 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 RARS2Q5T160 578 aaKnown RBP4.03□□□□□ -1.76
CD46-213ENST00000471987 GCNT6Q5T4J0 391 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 CORO6Q6QEF8 472 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 CPLX4Q7Z7G2 160 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 OR2T11Q8NH01 316 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 KCNG4Q8TDN1 519 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 HSD17B8Q92506 261 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 DAZLQ92904 295 aaKnown RBP4.03□□□□□ -1.76
CD46-213ENST00000471987 SGK494Q96LW2 274 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 TBATAQ96M53 351 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 ZNF582Q96NG8 517 aaPredicted RBP4.03□□□□□ -1.76
CD46-213ENST00000471987 DACH2Q96NX9 599 aa4.03□□□□□ -1.76
CD46-213ENST00000471987 HGH1Q9BTY7 390 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms