RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 AGAP2Q99490 1192 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 SOX17Q9H6I2 414 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ESRP2Q9H6T0 727 aaKnown RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 MRM3Q9HC36 420 aaKnown RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ST7Q9NRC1 585 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 KLC4Q9NSK0 619 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TMEM160Q9NX00 188 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 B4GALT6Q9UBX8 382 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CD84Q9UIB8 345 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 HPCAL4Q9UM19 191 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 SRPRBQ9Y5M8 271 aaKnown RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ANKRD12Q6UB98 2062 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 CXorf51AA0A1B0GTR3 108 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 KDM4EB2RXH2 506 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 EIF3CLB5ME19 914 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 GPRIN2O60269 458 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 BMP10O95393 424 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ACPPP15309 386 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 FDXRP22570 491 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ADH7P40394 386 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 LMAN1P49257 510 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ST13P50502 369 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ATP5J2P56134 94 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ACKR1Q16570 336 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 TDRD12Q587J7 1177 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 GPRC6AQ5T6X5 926 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 FBXO42Q6P3S6 717 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ABHD17CQ6PCB6 329 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ADAMTSL4Q6UY14 1074 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 Q6ZVL8 140 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 GALNTL5Q7Z4T8 443 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 DNAAF5Q86Y56 855 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 RBM12BQ8IXT5 1001 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ELOA2Q8IYF1 753 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 GPR135Q8IZ08 494 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 FAM98AQ8NCA5 519 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 ZFPM2Q8WW38 1151 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 RNASE6Q93091 150 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 C8orf44Q96CB5 159 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 PGAP3Q96FM1 320 aaPredicted RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 LRRC46Q96FV0 321 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 EIF3CQ99613 913 aaKnown RBP6.31□□□□□ -1.4
HDAC3-206ENST00000471968 PKP2Q99959 881 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 SH3GL2Q99962 352 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 TTYH2Q9BSA4 534 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 SP110Q9HB58 689 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 SYTL2Q9HCH5 934 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 PLCB1Q9NQ66 1216 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 HRASLS2Q9NWW9 162 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 KCTD5Q9NXV2 234 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 LIMCH1Q9UPQ0 1083 aa6.31□□□□□ -1.4
HDAC3-206ENST00000471968 FREM1Q5H8C1 2179 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 IGLV3-10A0A075B6K4 115 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 NSG1A0A0A6YYJ2 146 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 OR5K3A6NET4 321 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 I6L893 689 aaPredicted RBP6.3□□□□□ -1.4
HDAC3-206ENST00000471968 MAP2K7O14733 419 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 SERPINA7P05543 415 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 GLI4P10075 376 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 VDRP11473 427 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 TNFAIP3P21580 790 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 RPL10P27635 214 aaKnown RBP6.3□□□□□ -1.4
HDAC3-206ENST00000471968 NSG1P42857 185 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 GCLMP48507 274 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 KPNA2P52292 529 aaKnown RBP6.3□□□□□ -1.4
HDAC3-206ENST00000471968 APBA1Q02410 837 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 GRM3Q14832 879 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 TAF5Q15542 800 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 RHBDD2Q6NTF9 364 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 LCLAT1Q6UWP7 414 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 DEFB106AQ8N104 65 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 AOPEPQ8N6M6 819 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 SCMH1Q96GD3 660 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 SPSB2Q99619 263 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 BACH2Q9BYV9 841 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 ZYG11BQ9C0D3 744 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 SLC22A11Q9NSA0 550 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 TXLNGQ9NUQ3 528 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 ANKRD10Q9NXR5 420 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 LHX3Q9UBR4 397 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 TRIM10Q9UDY6 481 aa6.3□□□□□ -1.4
HDAC3-206ENST00000471968 WBP11Q9Y2W2 641 aaKnown RBP6.3□□□□□ -1.4
HDAC3-206ENST00000471968 PHF3Q92576 2039 aaKnown RBP6.3□□□□□ -1.4
HDAC3-206ENST00000471968 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 UBFD1O14562 309 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 TFECO14948 347 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 PRMT3O60678 531 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 HEXIM1O94992 359 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 ITGAMP11215 1152 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 CD46P15529 392 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 CDH3P22223 829 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 ACVR2AP27037 513 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 SERPINA4P29622 427 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms