RNA–Protein interactions for RNA: ENST00000471808.1

RASSF4-206, Transcript of Ras association domain family member 4, human

TSL 3

Gene RASSF4, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RASSF4-206	ENST00000471808	SNX12	Q9UMY4	172 aa		10.85	□□□□□ -0.67
RASSF4-206	ENST00000471808	TCAF1	Q9Y4C2	921 aa		10.85	□□□□□ -0.67
RASSF4-206	ENST00000471808	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.85	□□□□□ -0.67
RASSF4-206	ENST00000471808	SMG1	Q96Q15	3661 aa	Known RBP	10.85	□□□□□ -0.67
RASSF4-206	ENST00000471808	LILRA5	A6NI73	299 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	CFAP99	D6REC4	459 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	EFS	O43281	561 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	KCNJ13	O60928	360 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	ITGB2	P05107	769 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	POLB	P06746	335 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	RALB	P11234	206 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	TYRP1	P17643	537 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	MGAT1	P26572	445 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	HAL	P42357	657 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	EPHA4	P54764	986 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	GFER	P55789	205 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	GPS1	Q13098	491 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	TGIF1	Q15583	401 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	CYP1B1	Q16678	543 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	CLPP	Q16740	277 aa	Predicted RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	ANKRD22	Q5VYY1	191 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	METRNL	Q641Q3	311 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	TMEM71	Q6P5X7	295 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	CCDC137	Q6PK04	289 aa	Known RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	C4orf22	Q6V702	233 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	PPHLN1	Q8NEY8	458 aa	Known RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	ACTRT1	Q8TDG2	376 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	EXTL1	Q92935	676 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	PMEPA1	Q969W9	287 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	RMDN2	Q96LZ7	410 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	INSM2	Q96T92	566 aa	Predicted RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	SLC40A1	Q9NP59	571 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	POT1	Q9NUX5	634 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	IMP3	Q9NV31	184 aa	Known RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	SYBU	Q9NX95	663 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	FOXJ2	Q9P0K8	574 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	ACSL6	Q9UKU0	697 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	HELZ2	Q9BYK8	2649 aa	Known RBP	10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	ZNF462	Q96JM2	2506 aa		10.84	□□□□□ -0.67
RASSF4-206	ENST00000471808	UNC13C	Q8NB66	2214 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	OR1I1	O60431	355 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	PRAMEF10	O60809	474 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	PHF2	O75151	1096 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	AVIL	O75366	819 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	TMEM63A	O94886	807 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	UBXN7	O94888	489 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	FGF3	P11487	239 aa	Predicted RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	MTHFD1	P11586	935 aa	Known RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	TPSB2	P20231	275 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	CD82	P27701	267 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	NMBR	P28336	390 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	PREP	P48147	710 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	ATP1A2	P50993	1020 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	GNG11	P61952	73 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	ACVR1	Q04771	509 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	PDAP1	Q13442	181 aa	Known RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	KCNJ11	Q14654	390 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	TPSAB1	Q15661	275 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	ZNF658B	Q4V348	819 aa	Predicted RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	PCID2	Q5JVF3	399 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	AFTPH	Q6ULP2	937 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	CES3	Q6UWW8	571 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	NAPRT	Q6XQN6	538 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	ATG14	Q6ZNE5	492 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	LDB1	Q86U70	411 aa	Predicted RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	VASH2	Q86V25	355 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	CFAP206	Q8IYR0	622 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	C17orf53	Q8N3J3	647 aa	Predicted RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	AVL9	Q8NBF6	648 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	OR6P1	Q8NGX9	317 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	HM13	Q8TCT9	377 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	HEXDC	Q8WVB3	486 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	CPT1B	Q92523	772 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	RSC1A1	Q92681	617 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	USP7	Q93009	1102 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	CAPZA3	Q96KX2	299 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	LINC00615	Q96LM1	132 aa	Predicted RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	C12orf66	Q96MD2	445 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	NAP1L3	Q99457	506 aa	Predicted RBP	10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	DPYSL5	Q9BPU6	564 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	CCM2	Q9BSQ5	444 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	TRIM4	Q9C037	500 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	UCK1	Q9HA47	277 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	OCIAD1	Q9NX40	245 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	RIMKLB	Q9ULI2	386 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	NEU2	Q9Y3R4	380 aa		10.83	□□□□□ -0.68
RASSF4-206	ENST00000471808	COL6A6	A6NMZ7	2263 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	C9orf172	C9J069	976 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	GOLGA8M	H3BSY2	632 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	HGS	O14964	777 aa	Predicted RBP	10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	FANCG	O15287	622 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	KIF1C	O43896	1103 aa	Known RBP	10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	SLC35G4	P0C7Q5	338 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	AMD1	P17707	334 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	PDHA2	P29803	388 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	LEPR	P48357	1165 aa	Known RBP	10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	NPY2R	P49146	381 aa		10.82	□□□□□ -0.68
RASSF4-206	ENST00000471808	CSRP3	P50461	194 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms