RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 A0A1W2PQ67 120 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 CCDC78A2IDD5 438 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 APOL1O14791 398 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 PPP1R12AO14974 1030 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 SOCS5O75159 536 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ALX3O95076 343 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ZWINTO95229 277 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 SLC4A1P02730 911 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 C9P02748 559 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 HOXC4P09017 264 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 CD48P09326 243 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 FOLR1P15328 257 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ZFXP17010 805 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 EGR1P18146 543 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 KELP23276 732 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 CTNNA2P26232 953 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 MMP12P39900 470 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ACTR1BP42025 376 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ARHGAP25P42331 645 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 SLC1A1P43005 524 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 MAGEA1P43355 309 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ZNF75DP51815 510 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 TDGF1P3P51864 188 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 SMSP52788 366 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 TAS2R40P59535 323 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ACTR1AP61163 376 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 MAXP61244 160 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 RPS15P62841 145 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 OTUD4Q01804 1114 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 SLC10A7Q0GE19 358 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 AP1B1Q10567 949 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 RALGDSQ12967 914 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 GSE1Q14687 1217 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 KCNAB1Q14722 419 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 CYTH1Q15438 398 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 IFI16Q16666 785 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 UGP2Q16851 508 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.73□□□□□ -1.49
VARS-222ENST00000470953 ANKRD20A8PQ5CZ79 823 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ARMC12Q5T9G4 340 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 AFMIDQ63HM1 303 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 NCBP2-AS2Q69YL0 99 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ZNF324BQ6AW86 544 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 TXNRD3NBQ6F5E7 133 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 PNCKQ6P2M8 343 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 CERS6Q6ZMG9 384 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 SPOCD1Q6ZMY3 1216 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 MED25Q71SY5 747 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 PPP1R3BQ86XI6 285 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 LRRC49Q8IUZ0 686 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 TMEM151BQ8IW70 566 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ARHGAP12Q8IWW6 846 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ZADH2Q8N4Q0 377 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ENDOVQ8N8Q3 282 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 TMEM102Q8N9M5 508 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 SEC14L1Q92503 715 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 NUS1Q96E22 293 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 RMND5BQ96G75 393 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 PSKH2Q96QS6 385 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 NUDCD1Q96RS6 583 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 CHP1Q99653 195 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 FERMT1Q9BQL6 677 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 MGME1Q9BQP7 344 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 TRIM56Q9BRZ2 755 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 FRMD8Q9BZ67 464 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 CHST8Q9H2A9 424 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 WDR26Q9H7D7 661 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 ETNK2Q9NVF9 386 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 TRNAU1APQ9NX07 287 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 DDX56Q9NY93 547 aaKnown RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 INTUQ9ULD6 942 aa5.73□□□□□ -1.49
VARS-222ENST00000470953 PCYT1BQ9Y5K3 369 aaPredicted RBP5.73□□□□□ -1.49
VARS-222ENST00000470953 CCDC88CQ9P219 2028 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 TSPAN11A1L157 253 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 TTC24A2A3L6 582 aaPredicted RBP5.72□□□□□ -1.49
VARS-222ENST00000470953 SOWAHDA6NJG2 315 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 A8MX80 341 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 PCDH17O14917 1159 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 PSTPIP1O43586 416 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 NRDCO43847 1150 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 SLCO2B1O94956 709 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 MT-ND3P03897 115 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 CAPN1P07384 714 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 MYCLP1P12525 358 aaPredicted RBP5.72□□□□□ -1.49
VARS-222ENST00000470953 TYRP1P17643 537 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 COMTP21964 271 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 VIPR1P32241 457 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 CETN2P41208 172 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 RGRP47804 291 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 CSNK1DP48730 415 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 VAV2P52735 878 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 HHEXQ03014 270 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 GBE1Q04446 702 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 GALNT2Q10471 571 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 GPS2Q13227 327 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 TFDP2Q14188 446 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 MYBPC3Q14896 1274 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 PDK1Q15118 436 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 RALGPS1Q5JS13 557 aa5.72□□□□□ -1.49
VARS-222ENST00000470953 PRAMEF17Q5VTA0 474 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms