RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 HEATR9A2RTY3 570 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 KCNK1O00180 336 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 MYBL1P10243 752 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 MX2P20592 715 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 GSE1Q14687 1217 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 SSPNQ14714 243 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 ANO6Q4KMQ2 910 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 TMEM220Q6QAJ8 160 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 Q6ZS92 163 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 CARFQ8N187 725 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 KCTD6Q8NC69 237 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 FATE1Q969F0 183 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 BTBD6Q96KE9 485 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 C12orf66Q96MD2 445 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 VPS35Q96QK1 796 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 ERGIC2Q96RQ1 377 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 BARD1Q99728 777 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 DPH2Q9BQC3 489 aaPredicted RBP18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZCCHC2Q9C0B9 1178 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZBTB20Q9HC78 741 aaPredicted RBP18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 FAM8A1Q9UBU6 413 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 TMPRSS11EQ9UL52 423 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 PTRH2Q9Y3E5 179 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 FER1L5A0AVI2 2057 aa18.45■□□□□ 0.54
NCKIPSD-209ENST00000470006 OR2AG2A6NM03 316 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 E7EQ34 232 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 HLA-DPA1P20036 260 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 HADHAP40939 763 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 FOLR3P41439 243 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 SLC25A11Q02978 314 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 OR4E2Q8NGC2 313 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 INSM2Q96T92 566 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 DHRS4Q9BTZ2 278 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 WWP1Q9H0M0 922 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 SYTL2Q9HCH5 934 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 LIMA1Q9UHB6 759 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 SLC24A2Q9UI40 661 aa18.44■□□□□ 0.54
NCKIPSD-209ENST00000470006 A0A1B0GUH1 482 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 GSAPA4D1B5 854 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 LRRC53A6NM62 1247 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 MASP2O00187 686 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZNF749O43361 778 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 HBQ1P09105 142 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 ITGA3P26006 1051 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 CTSCP53634 463 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 DMPKQ09013 629 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 DPYSL3Q14195 570 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 HIF1AQ16665 826 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 CYP2A13Q16696 494 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 HADHQ16836 314 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 FAM182AQ5T1J6 154 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 CCDC183Q5T5S1 534 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 SPOCD1Q6ZMY3 1216 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 B4GALNT4Q76KP1 1039 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZNF571Q7Z3V5 609 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 RASGEF1AQ8N9B8 481 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 GRHL3Q8TE85 626 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 N4BP2L2Q92802 583 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZNF830Q96NB3 372 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 TRAPPC9Q96Q05 1148 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 WDR77Q9BQA1 342 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 C17orf62Q9BQA9 187 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 CBX8Q9HC52 389 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 ATP13A2Q9NQ11 1180 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 C1GALT1Q9NS00 363 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 P4HTMQ9NXG6 502 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 IP6K2Q9UHH9 426 aa18.43■□□□□ 0.54
NCKIPSD-209ENST00000470006 CSMD2Q7Z408 3487 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 CNTRLQ7Z7A1 2325 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 DDX3XO00571 662 aaKnown RBP eCLIP18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 SNRPB2P08579 225 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 EDN3P14138 238 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 LMAN1P49257 510 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 GBE1Q04446 702 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 CDC16Q13042 620 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 PPP2R5EQ16537 467 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZFYVE27Q5T4F4 411 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 C1orf189Q5VU69 101 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 MYO7BQ6PIF6 2116 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 GDF7Q7Z4P5 450 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 NT5DC3Q86UY8 548 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 GPR135Q8IZ08 494 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 BEND7Q8N7W2 519 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 DNAJB14Q8TBM8 379 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 CNDP1Q96KN2 507 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 GBP5Q96PP8 586 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 TRIB3Q96RU7 358 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 CEP41Q9BYV8 373 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 XPO4Q9C0E2 1151 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 NDOR1Q9UHB4 597 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 ANAPC7Q9UJX3 599 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 MYO6Q9UM54 1294 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 NOVA2Q9UNW9 492 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 COLEC10Q9Y6Z7 277 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 ZFHX3Q15911 3703 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 HIVEP1P15822 2718 aa18.42■□□□□ 0.54
NCKIPSD-209ENST00000470006 AURKAO14965 403 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 UGT1A9O60656 530 aa18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 KLF7O75840 302 aaPredicted RBP18.41■□□□□ 0.54
NCKIPSD-209ENST00000470006 SLC35G4P0C7Q5 338 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms