RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 OR52A4PA6NMU1 304 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 KIR2DS3K7RE56 304 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 PPP1R12AO14974 1030 aaPredicted RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 GRID2O43424 1007 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 NUAK1O60285 661 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 CBX6O95503 412 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 RECKO95980 971 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 RBP3P10745 1247 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 XRCC1P18887 633 aaPredicted RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 GARSP41250 739 aaKnown RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 MMP13P45452 471 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 PGDP52209 483 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 EIF3EP60228 445 aaKnown RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 NIPAL4Q0D2K0 466 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 IL11RAQ14626 422 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 KIR2DS5Q14953 304 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 OASLQ15646 514 aaKnown RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 UGT8Q16880 541 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 SLC6A19Q695T7 634 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 ZNF547Q8IVP9 402 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 TMEM151BQ8IW70 566 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 MMGT1Q8N4V1 131 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 FDCSPQ8NFU4 85 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 ARRDC2Q8TBH0 407 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 C1orf54Q8WWF1 131 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 SLCO2A1Q92959 643 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 SH3KBP1Q96B97 665 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 ING2Q9H160 280 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 KLC4Q9NSK0 619 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 SAE1Q9UBE0 346 aaPredicted RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 PCYOX1Q9UHG3 505 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 FEZ2Q9UHY8 353 aaPredicted RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 TMPRSS11EQ9UL52 423 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 WDR37Q9Y2I8 494 aa13.3□□□□□ -0.28
RPP40-204ENST00000468105 PCDHGA9Q9Y5G4 932 aaKnown RBP13.3□□□□□ -0.28
RPP40-204ENST00000468105 POLEQ07864 2286 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 F8P00451 2351 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 A0A1W2PQ67 120 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 DDAH2O95865 285 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 NELFEP18615 380 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 NFKBIAP25963 317 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 PTPN4P29074 926 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 SPINT3P49223 89 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 ITGA1P56199 1179 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 PPIDQ08752 370 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 C2orf54Q08AI8 447 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 GPR18Q14330 331 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 NR6A1Q15406 480 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 SEPT7Q16181 437 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
RPP40-204ENST00000468105 CACHD1Q5VU97 1274 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 PRSS42Q7Z5A4 293 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 ADGRG6Q86SQ4 1221 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 CDKL3Q8IVW4 592 aaPredicted RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 GRK7Q8WTQ7 553 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 ATG4AQ8WYN0 398 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 FATE1Q969F0 183 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 TSGA13Q96PP4 275 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 QKIQ96PU8 341 aaKnown RBP eCLIP13.29□□□□□ -0.28
RPP40-204ENST00000468105 TDRD1Q9BXT4 1180 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 DDX47Q9H0S4 455 aaKnown RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 OR2AG1Q9H205 316 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 UCK1Q9HA47 277 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 SEMA5BQ9P283 1151 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 DNPEPQ9ULA0 475 aa13.29□□□□□ -0.28
RPP40-204ENST00000468105 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
RPP40-204ENST00000468105 H7C0C1 242 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 MTX2O75431 263 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 RASSF9O75901 435 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 EBLN1P0CF75 366 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 CCNCP24863 283 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 RPL10P27635 214 aaKnown RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 STIP1P31948 543 aaKnown RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 CA5AP35218 305 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 HSPA9P38646 679 aaKnown RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 CAPZBP47756 277 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 ATP5OP48047 213 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 DRG2P55039 364 aaKnown RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 GPS2Q13227 327 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 PRKD1Q15139 912 aaPredicted RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 PLEKHN1Q494U1 663 aaPredicted RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 MARC1Q5VT66 337 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 TIGD7Q6NT04 549 aaPredicted RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 CRTC3Q6UUV7 619 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 PPP1R3BQ86XI6 285 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 GPR150Q8NGU9 434 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 INPP5DQ92835 1189 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 SLC41A2Q96JW4 573 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.28□□□□□ -0.28
RPP40-204ENST00000468105 SLC40A1Q9NP59 571 aa13.28□□□□□ -0.28
RPP40-204ENST00000468105 ASF1BQ9NVP2 202 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms