RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MAP7Q14244 749 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 STYXQ8WUJ0 223 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 UBXN4Q92575 508 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 C12orf66Q96MD2 445 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 INSM2Q96T92 566 aaPredicted RBP18.65■□□□□ 0.58
COL7A1-207ENST00000467985 CD180Q99467 661 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 FAM96AQ9H5X1 160 aa18.65■□□□□ 0.58
COL7A1-207ENST00000467985 GPN2Q9H9Y4 310 aaPredicted RBP18.65■□□□□ 0.58
COL7A1-207ENST00000467985 TRBV5-4A0A0C4DH59 114 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ZNF891A8MT65 544 aaPredicted RBP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SGTAO43765 313 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 LIASO43766 372 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 KIF1CO43896 1103 aaKnown RBP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 GSTM1P09488 218 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 TPH1P17752 444 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 NELFEP18615 380 aaKnown RBP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ACRV1P26436 265 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 FDFT1P37268 417 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 GSTM4Q03013 218 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 CACNG1Q06432 222 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 POU6F1Q14863 301 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 OASLQ15646 514 aaKnown RBP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SKIDA1Q1XH10 827 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ZRANB3Q5FWF4 1079 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ZNF449Q6P9G9 518 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 FAM92BQ6ZTR7 304 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 TAS2R42Q7RTR8 314 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SERPINA9Q86WD7 417 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SLC13A5Q86YT5 568 aaPredicted RBP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 CFAP206Q8IYR0 622 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ESX1Q8N693 406 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ATG4AQ8WYN0 398 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 EXTL1Q92935 676 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SLC45A3Q96JT2 553 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 OR6C1Q96RD1 312 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SLC12A9Q9BXP2 914 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ULBP3Q9BZM4 244 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 KIR3DX1Q9H7L2 352 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 SEMA5BQ9P283 1151 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 ZNF148Q9UQR1 794 aa18.64■□□□□ 0.57
COL7A1-207ENST00000467985 CFAP20Q9Y6A4 193 aaKnown RBP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
COL7A1-207ENST00000467985 OR5K3A6NET4 321 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 MROH6A6NGR9 719 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 CCL22O00626 93 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 DLGAP3O95886 979 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 PSMA3P25788 255 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 CDH17Q12864 832 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 KRT33BQ14525 404 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 RPS6KA1Q15418 735 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 TBR1Q16650 682 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 LINC00303Q3SY05 128 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 TIPARPQ7Z3E1 657 aaKnown RBP18.63■□□□□ 0.57
COL7A1-207ENST00000467985 OOSP2Q86WS3 158 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 KMT5CQ86Y97 462 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 CARFQ8N187 725 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 DNAAF3Q8N9W5 541 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 CDKN2AIPNLQ96HQ2 116 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 SEMA4CQ9C0C4 833 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 FAM8A1Q9UBU6 413 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 SLC24A2Q9UI40 661 aa18.63■□□□□ 0.57
COL7A1-207ENST00000467985 QSOX1O00391 747 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 ZSCAN12O43309 604 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 SUN1O94901 812 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 AP2A2O94973 939 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 POLBP06746 335 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 FGF5P12034 268 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 STAT5AP42229 794 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 LMAN1P49257 510 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 SH3BP2P78314 561 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 CYP4F2P78329 520 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 RPA4Q13156 261 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL7A1-207ENST00000467985 DNTTIP2Q5QJE6 756 aaKnown RBP18.62■□□□□ 0.57
COL7A1-207ENST00000467985 MEI1Q5TIA1 1274 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 CAPRIN2Q6IMN6 1127 aaKnown RBP18.62■□□□□ 0.57
COL7A1-207ENST00000467985 ARMC6Q6NXE6 501 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 ZNF662Q6ZS27 426 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 BPHLQ86WA6 291 aaPredicted RBP18.62■□□□□ 0.57
COL7A1-207ENST00000467985 RASGRP3Q8IV61 690 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 SIDT2Q8NBJ9 832 aaKnown RBP18.62■□□□□ 0.57
COL7A1-207ENST00000467985 SPDYE1Q8NFV5 336 aaPredicted RBP18.62■□□□□ 0.57
COL7A1-207ENST00000467985 SLC41A2Q96JW4 573 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 RMDN2Q96LZ7 410 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 CATSPER2Q96P56 530 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 PDE7BQ9NP56 450 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 HRASLS2Q9NWW9 162 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 PPP2R2CQ9Y2T4 447 aa18.62■□□□□ 0.57
COL7A1-207ENST00000467985 HEATR9A2RTY3 570 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 TLCD2A6NGC4 264 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 B8ZZF3 427 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 E7EVH7 732 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 IFRD1O00458 451 aaPredicted RBP18.61■□□□□ 0.57
COL7A1-207ENST00000467985 IFNB1P01574 187 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 CD151P48509 253 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 ARL4DP49703 201 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 CDKN1CP49918 316 aaPredicted RBP18.61■□□□□ 0.57
COL7A1-207ENST00000467985 MC1RQ01726 317 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 C6orf15Q6UXA7 325 aaPredicted RBP18.61■□□□□ 0.57
COL7A1-207ENST00000467985 PPP1R3BQ86XI6 285 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms