RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	MCMBP	Q9BTE3	642 aa		11.89	□□□□□ -0.51
CTNS-205	ENST00000467663	MKS1	Q9NXB0	559 aa		11.89	□□□□□ -0.51
CTNS-205	ENST00000467663	SLC2A6	Q9UGQ3	507 aa		11.89	□□□□□ -0.51
CTNS-205	ENST00000467663	TBK1	Q9UHD2	729 aa		11.89	□□□□□ -0.51
CTNS-205	ENST00000467663	GPR34	Q9UPC5	381 aa		11.89	□□□□□ -0.51
CTNS-205	ENST00000467663	FAM208B	Q5VWN6	2430 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	URB1	O60287	2271 aa	Known RBP	11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	CCDC162P	A2VCL2	907 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	AGAP14	A8MT82	685 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	AURKA	O14965	403 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	PRPF4	O43172	522 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	BRINP1	O60477	761 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	CLDN7	O95471	211 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	MPO	P05164	745 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	PIRT	P0C851	137 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	CD9	P21926	228 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	FOXN2	P32314	431 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	EIF2S3	P41091	472 aa	Known RBP	11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	LSS	P48449	732 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	SPINT3	P49223	89 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	SERPINB8	P50452	374 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	ARSD	P51689	593 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	POU4F1	Q01851	419 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	SLC18A2	Q05940	514 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	DPT	Q07507	201 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	INSC	Q1MX18	579 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	LRRC66	Q68CR7	880 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663		Q6ZVL8	140 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	ZNF765	Q7L2R6	523 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	KY	Q8NBH2	561 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	GPR156	Q8NFN8	814 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	MZB1	Q8WU39	189 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	FGF11	Q92914	225 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	VPS39	Q96JC1	886 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	CCDC3	Q9BQI4	270 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	MRPL40	Q9NQ50	206 aa	Known RBP	11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	GULP1	Q9UBP9	304 aa		11.88	□□□□□ -0.51
CTNS-205	ENST00000467663	DSP	P15924	2871 aa	Known RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	TRBV5-4	A0A0C4DH59	114 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	GLYATL1P3	A0A0U1RQE8	302 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	PRSS38	A1L453	326 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	TRIM49D1	C9J1S8	452 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663		H3BMM5	538 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	NTN3	O00634	580 aa	Predicted RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	TM9SF1	O15321	606 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	NDUFS3	O75489	264 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SRP72	O76094	671 aa	Known RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	DXO	O77932	396 aa	Known RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	AHSG	P02765	367 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	FUCA1	P04066	466 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CEACAM5	P06731	702 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	GSTA1	P08263	222 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	COL6A2	P12110	1019 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	BRAF	P15056	766 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CRABP2	P29373	138 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	MC4R	P32245	332 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SLC26A3	P40879	764 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CCNF	P41002	786 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SLC1A2	P43004	574 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CCT5	P48643	541 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SLC12A2	P55011	1212 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	XIAP	P98170	497 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CDK3	Q00526	305 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	PTS	Q03393	145 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	ITIH4	Q14624	930 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	TBC1D25	Q3MII6	688 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	FAM45BP	Q6NSW5	357 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	IGF2-AS	Q6U949	168 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	RBM44	Q6ZP01	1051 aa	Known RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	TAF8	Q7Z7C8	310 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	HEATR4	Q86WZ0	1026 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SRRM1	Q8IYB3	904 aa	Known RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	UNC5B	Q8IZJ1	945 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	LSMEM2	Q8N112	164 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CYP4X1	Q8N118	509 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	OTUD6B	Q8N6M0	293 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	OR6C4	Q8NGE1	309 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	FAM45A	Q8TCE6	357 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SMIM14	Q96QK8	99 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	AGAP2	Q99490	1192 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	TMEM168	Q9H0V1	697 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	ABCG8	Q9H221	673 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CCDC68	Q9H2F9	335 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	POLR1B	Q9H9Y6	1135 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	POPDC3	Q9HBV1	291 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CYP4F12	Q9HCS2	524 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SMOX	Q9NWM0	555 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	SIRPG	Q9P1W8	387 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	CTNNAL1	Q9UBT7	734 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	DCDC2	Q9UHG0	476 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	FKBPL	Q9UIM3	349 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	KCTD3	Q9Y597	815 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	ENTPD2	Q9Y5L3	495 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	LRP4	O75096	1905 aa		11.87	□□□□□ -0.51
CTNS-205	ENST00000467663	ADAMTS20	P59510	1910 aa		11.86	□□□□□ -0.51
CTNS-205	ENST00000467663	ASXL3	Q9C0F0	2248 aa		11.86	□□□□□ -0.51
CTNS-205	ENST00000467663	ZFYVE26	Q68DK2	2539 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms