RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 ZNF140P52738 457 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 IL10RBQ08334 325 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 KIAA0040Q15053 153 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 PTPRNQ16849 979 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 OVOS1Q6IE37 1185 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 FBXL22Q6P050 247 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 TMEM53Q6P2H8 277 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 MFSD4AQ8N468 514 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SIDT2Q8NBJ9 832 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 OR2T12Q8NG77 320 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 OR8J3Q8NGG0 315 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 FAR1Q8WVX9 515 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 VMP1Q96GC9 406 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 NSMCE3Q96MG7 304 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SMIM14Q96QK8 99 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF382Q96SR6 550 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 PSD2Q9BQI7 771 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ALOXE3Q9BYJ1 711 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 WDR12Q9GZL7 423 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 POLR1EQ9GZS1 481 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 LIMD1Q9UGP4 676 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ADGRE2Q9UHX3 823 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SNX5Q9Y5X3 404 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 IGLV3-10A0A075B6K4 115 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 LOC100130705A0A1B0GUX0 176 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF99A8MXY4 864 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 LSM1O15116 133 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 XPNPEP2O43895 674 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 NIPSNAP2O75323 286 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 GABARAPO95166 117 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ITGB1P05556 798 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 CAPN1P07384 714 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 PBX3P40426 434 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 TBX4P57082 545 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 EMX1Q04741 257 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 EPS8Q12929 822 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SERINC3Q13530 473 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ADPRMQ3LIE5 342 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ZNF691Q5VV52 312 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 RAP1GAP2Q684P5 730 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SPATA2LQ8IUW3 424 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 OR10A6Q8NH74 314 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 RHBDF1Q96CC6 855 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SLC47A1Q96FL8 570 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 TRIB3Q96RU7 358 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 RBM4BQ9BQ04 359 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 RBM4Q9BWF3 364 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 CCDC90BQ9GZT6 254 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ACTR8Q9H981 624 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 SACM1LQ9NTJ5 587 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 NLE1Q9NVX2 485 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 RIMKLBQ9ULI2 386 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 POLR3HQ9Y535 204 aaPredicted RBP12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 ACTL7AQ9Y615 435 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 PMF1-BGLAPU3KQ54 211 aa12.8□□□□□ -0.36
PDZRN3-205ENST00000466780 HS6ST1O60243 411 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 MGEA5O60502 916 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 PRKD3O94806 890 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 EPOP01588 193 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 TGM1P22735 817 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 DCTP40126 519 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 TOP3AQ13472 1001 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 C18orf21Q32NC0 220 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 RFTN2Q52LD8 501 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 IL27RAQ6UWB1 636 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 FRA10AC1Q70Z53 315 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 GPSM1Q86YR5 675 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 SVOPLQ8N434 492 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 CNIH3Q8TBE1 160 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 EEF1AKMT1Q8WVE0 214 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 MYEOVQ96EZ4 313 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 PCDH12Q9NPG4 1184 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 CD274Q9NZQ7 290 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 TMEFF2Q9UIK5 374 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 M0QZQ0 153 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 OR1I1O60431 355 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 RAMP2O60895 175 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 NDUFS3O75489 264 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 BMP4P12644 408 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 ACVR2AP27037 513 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 ALDH4A1P30038 563 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 INAVAQ3KP66 663 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 MSRB3Q8IXL7 192 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 PIANPQ8IYJ0 282 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 OR4K2Q8NGD2 314 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 METTL6Q8TCB7 284 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 LINGO1Q96FE5 620 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 ITCHQ96J02 903 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 PARK7Q99497 189 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 HERC2P3Q9BVR0 1158 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 INVSQ9Y283 1065 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 GIT1Q9Y2X7 761 aa12.79□□□□□ -0.36
PDZRN3-205ENST00000466780 GNGT2O14610 69 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 GSTA4O15217 222 aa12.78□□□□□ -0.36
PDZRN3-205ENST00000466780 GMNNO75496 209 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms