RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 BPTFQ12830 3046 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 IGHV5-10-1A0A0J9YXX1 117 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 MGAT4DA6NG13 374 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 MROH6A6NGR9 719 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 OR5K4A6NMS3 321 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 GOLGA8KD6RF30 607 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 GOLGA8TH3BQL2 631 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 PLD2O14939 933 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 SGTAO43765 313 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 AVILO75366 819 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 CAPNS1P04632 268 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 SLC35G4P0C7Q5 338 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 AMD1P17707 334 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TPSB2P20231 275 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TNFRSF8P28908 595 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 CCKBRP32239 447 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 ETV5P41161 510 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 GPR3P46089 330 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 PRLHRP49683 370 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 GFERP55789 205 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 UBE2IP63279 158 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 BOP1Q14137 746 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 KRT33BQ14525 404 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 SEMA3AQ14563 771 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 KCNJ11Q14654 390 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 NR1D2Q14995 579 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TPSAB1Q15661 275 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 CYP1B1Q16678 543 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TBC1D25Q3MII6 688 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 GPR33Q49SQ1 333 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 BCL7AQ4VC05 210 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 PCID2Q5JVF3 399 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 BEND6Q5SZJ8 279 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 ABRAXAS1Q6UWZ7 409 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 ZNF574Q6ZN55 896 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 FAM129CQ86XR2 697 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 SLITRK4Q8IW52 837 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 MPP5Q8N3R9 675 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 HM13Q8TCT9 377 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 GRK7Q8WTQ7 553 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 CPT1BQ92523 772 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 SH3KBP1Q96B97 665 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TRIM56Q9BRZ2 755 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 ANKZF1Q9H8Y5 726 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 CATSPERZQ9NTU4 200 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 POT1Q9NUX5 634 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 IL1RAPL1Q9NZN1 696 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 BFARQ9NZS9 450 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 ANAPC5Q9UJX4 755 aa9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TPRP12270 2363 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-205ENST00000466260 TRBV5-4A0A0C4DH59 114 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 UBA6A0AVT1 1052 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 AGAP14A8MT82 685 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 FANCGO15287 622 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 OR1I1O60431 355 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 UBXN7O94888 489 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 CCL4P13236 92 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 XRCC1P18887 633 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 ITPKBP27987 946 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 NSG1P42857 185 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 PREPP48147 710 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 ARCN1P48444 511 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 LSSP48449 732 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 NPY2RP49146 381 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 FNTAP49354 379 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 GPLD1P80108 840 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 SARNPP82979 210 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 CFHR1Q03591 330 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 DMPKQ09013 629 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 LAMB3Q13751 1172 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 GPR18Q14330 331 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 RPE65Q16518 533 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 TMEM71Q6P5X7 295 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 EMBQ6PCB8 327 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 TMEM26Q6ZUK4 368 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 LSMEM2Q8N112 164 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 OR2L2Q8NH16 312 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 OR4L1Q8NH43 312 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 HEXDCQ8WVB3 486 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 ELMO1Q92556 727 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 RSC1A1Q92681 617 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 ZNF669Q96BR6 464 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 MFSD3Q96ES6 412 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 CRELD1Q96HD1 420 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 PRR11Q96HE9 360 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 RMDN2Q96LZ7 410 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 TGM7Q96PF1 710 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 IL22Q9GZX6 179 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 COG4Q9H9E3 785 aa9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 AKAP7Q9P0M2 348 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 MARCH4Q9P2E8 410 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-205ENST00000466260 DNMT3AQ9Y6K1 912 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms