RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 CACTIN-AS1Q8N1I8 211 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 SLC25A41Q8N5S1 370 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 FGF11Q92914 225 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 NAT6Q93015 286 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 FUBP1Q96AE4 644 aaKnown RBP9.32□□□□□ -0.92
ATG3-203ENST00000465980 CCDC74AQ96AQ1 378 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 ECHDC3Q96DC8 303 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 PKNOX2Q96KN3 472 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 TBATAQ96M53 351 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 BBC3Q96PG8 261 aaPredicted RBP9.32□□□□□ -0.92
ATG3-203ENST00000465980 RANBP9Q96S59 729 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 RUFY1Q96T51 708 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 CCDC3Q9BQI4 270 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 TMEM109Q9BVC6 243 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 ROPN1BQ9BZX4 212 aaPredicted RBP9.32□□□□□ -0.92
ATG3-203ENST00000465980 ROPN1Q9HAT0 212 aaPredicted RBP9.32□□□□□ -0.92
ATG3-203ENST00000465980 FGF22Q9HCT0 170 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 PIH1D1Q9NWS0 290 aaKnown RBP9.32□□□□□ -0.92
ATG3-203ENST00000465980 PADI4Q9UM07 663 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 SATB2Q9UPW6 733 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 RAI2Q9Y5P3 530 aa9.32□□□□□ -0.92
ATG3-203ENST00000465980 TLN1Q9Y490 2541 aaKnown RBP9.32□□□□□ -0.92
ATG3-203ENST00000465980 A0A0U1RQS6 177 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 FAM237BA0A1B0GVD1 139 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 B4DGG1 531 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CACNB4O00305 520 aaPredicted RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 FZD6O60353 706 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SOCS5O75159 536 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 TCEA3O75764 348 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 PRLP01236 227 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 TNFP01375 233 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SHBGP04278 402 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 ALPIP09923 528 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CTPS1P17812 591 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 GM2AP17900 193 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 ADRA1DP25100 572 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 VIPR1P32241 457 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 RPL26P61254 145 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 POLR2LP62875 67 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 CRADDP78560 199 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 ZNF844Q08AG5 666 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 IFFO1Q0D2I5 559 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 TRAF2Q12933 501 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SPIDRQ14159 915 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CNGA3Q16281 694 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SPANXN3Q5MJ09 141 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CASC4Q6P4E1 433 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CAPN12Q6ZSI9 719 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 MTERF4Q7Z6M4 381 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 TAF8Q7Z7C8 310 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CROCCP2Q86T23 111 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 TMEM135Q86UB9 458 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 GKN2Q86XP6 184 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SFTPA2Q8IWL1 248 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SPACA3Q8IXA5 215 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SDR16C5Q8N3Y7 309 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 FSTL5Q8N475 847 aaPredicted RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 ARL10Q8N8L6 244 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 Q8N9G6 341 aaPredicted RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 PPHLN1Q8NEY8 458 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 OR56A4Q8NGH8 313 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 OR2W6PQ8NHA6 318 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 UHMK1Q8TAS1 419 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 GSDMBQ8TAX9 411 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 NUS1Q96E22 293 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CFAP36Q96G28 342 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SMIM14Q96QK8 99 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 CCDC77Q9BR77 488 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 KIFC1Q9BW19 673 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 LGR4Q9BXB1 951 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 ADGRE3Q9BY15 652 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 ACSS3Q9H6R3 686 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 WDR26Q9H7D7 661 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 POLR1BQ9H9Y6 1135 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 PLAC1Q9HBJ0 212 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 MRM3Q9HC36 420 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 CYP4F12Q9HCS2 524 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SAMD15Q9P1V8 674 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 FETUBQ9UGM5 382 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 SOX13Q9UN79 622 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 RPL26L1Q9UNX3 145 aaKnown RBP9.31□□□□□ -0.92
ATG3-203ENST00000465980 CHKBQ9Y259 395 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 ENTPD2Q9Y5L3 495 aa9.31□□□□□ -0.92
ATG3-203ENST00000465980 TCRBV9S1A1TA0A576 114 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 HEATR9A2RTY3 570 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 NPIPB15A6NHN6 443 aaPredicted RBP9.3□□□□□ -0.92
ATG3-203ENST00000465980 EIF4E1BA6NMX2 242 aaKnown RBP9.3□□□□□ -0.92
ATG3-203ENST00000465980 ANKRD66B4E2M5 251 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 HTRA2O43464 458 aaPredicted RBP9.3□□□□□ -0.92
ATG3-203ENST00000465980 USP1O94782 785 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 PGLSO95336 258 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 POLBP06746 335 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 IVLP07476 585 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 LHCGRP22888 699 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
ATG3-203ENST00000465980 STX2P32856 288 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 ETV3P41162 512 aa9.3□□□□□ -0.92
ATG3-203ENST00000465980 LSSP48449 732 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms